RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TRIT1Q9H3H1 467 aaKnown RBP9.22□□□□□ -0.93
CLK4-209ENST00000521621 OR6C2Q9NZP2 312 aa9.22□□□□□ -0.93
CLK4-209ENST00000521621 SPATA7Q9P0W8 599 aa9.22□□□□□ -0.93
CLK4-209ENST00000521621 SATB2Q9UPW6 733 aa9.22□□□□□ -0.93
CLK4-209ENST00000521621 UTP11Q9Y3A2 253 aaKnown RBP9.22□□□□□ -0.93
CLK4-209ENST00000521621 CABIN1Q9Y6J0 2220 aa9.22□□□□□ -0.93
CLK4-209ENST00000521621 TLCD2A6NGC4 264 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 TAF4O00268 1085 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 RAD51CO43502 376 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 SPAG6O75602 509 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 ALDH4A1P30038 563 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 HSD17B2P37059 387 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 SKIV2L2P42285 1042 aaKnown RBP9.21□□□□□ -0.93
CLK4-209ENST00000521621 CRADDP78560 199 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 NAB1Q13506 487 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 SLC5A12Q1EHB4 618 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 B3GNT8Q7Z7M8 397 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 OOSP2Q86WS3 158 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 CLDN19Q8N6F1 224 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 ZNF248Q8NDW4 579 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 MAGEC3Q8TD91 643 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 TFGQ92734 400 aaPredicted RBP9.21□□□□□ -0.93
CLK4-209ENST00000521621 MENTQ9BUN1 341 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 ASPSCR1Q9BZE9 553 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 POMT2Q9UKY4 750 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 DNAJC16Q9Y2G8 782 aa9.21□□□□□ -0.93
CLK4-209ENST00000521621 ARHGEF17Q96PE2 2063 aaPredicted RBP9.21□□□□□ -0.93
CLK4-209ENST00000521621 FAM149AA5PLN7 773 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 SLC16A5O15375 505 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 FGF5P12034 268 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 CLCN7P51798 805 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 UCNP55089 124 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 CALCOCO2Q13137 446 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 ARHGAP19Q14CB8 494 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 MSS51Q4VC12 460 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 UGT3A1Q6NUS8 523 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 KCNMB4Q86W47 210 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 EIF1ADQ8N9N8 165 aaKnown RBP9.21□□□□□ -0.94
CLK4-209ENST00000521621 CERS2Q96G23 380 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 WDR83Q9BRX9 315 aaKnown RBP9.21□□□□□ -0.94
CLK4-209ENST00000521621 POPDC3Q9HBV1 291 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 LAMA1P25391 3075 aa9.21□□□□□ -0.94
CLK4-209ENST00000521621 OR52A4PA6NMU1 304 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 RECKO95980 971 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 HOXB3P14651 431 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 NELFEP18615 380 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 RPL10P27635 214 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 RELAQ04206 551 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 KIR2DS3Q14952 304 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 NAA25Q14CX7 972 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 C16orf72Q14CZ0 275 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 SYTL3Q4VX76 610 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 PTRHD1Q6GMV3 140 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 UNC5AQ6ZN44 842 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 DTX1Q86Y01 620 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 DCUN1D3Q8IWE4 304 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 D2HGDHQ8N465 521 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 KIF18AQ8NI77 898 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 GSDMBQ8TAX9 411 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 PDLIM5Q96HC4 596 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 TRIM51Q9BSJ1 452 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 AARSD1Q9BTE6 412 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 TBC1D10AQ9BXI6 508 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 C1GALT1Q9NS00 363 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 FBXO5Q9UKT4 447 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 ATXN7L1Q9ULK2 861 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 MED16Q9Y2X0 877 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 DHRS7Q9Y394 339 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 TMEM184BQ9Y519 407 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 DNAH14Q0VDD8 3507 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 CCDC189A1A4V9 331 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 PSIP1O75475 530 aaKnown RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 PKLRP30613 574 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 CSTF2P33240 577 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLK4-209ENST00000521621 TTLL9Q3SXZ7 439 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
CLK4-209ENST00000521621 CRTC2Q53ET0 693 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 TEDDM1Q5T9Z0 273 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 CASC4Q6P4E1 433 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 C17orf53Q8N3J3 647 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 CEP112Q8N8E3 955 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 INPP5DQ92835 1189 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 FAM114A2Q9NRY5 505 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 C20orf96Q9NUD7 363 aaPredicted RBP9.2□□□□□ -0.94
CLK4-209ENST00000521621 ANKMY1Q9P2S6 941 aa9.2□□□□□ -0.94
CLK4-209ENST00000521621 SRRM3A6NNA2 597 aaPredicted RBP9.19□□□□□ -0.94
CLK4-209ENST00000521621 PDHA2P29803 388 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ELK3P41970 407 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 SLC1A2P43004 574 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 CYP4F3Q08477 520 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 SP140Q13342 867 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 GRB7Q14451 532 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 CYP2A13Q16696 494 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 TMEM164Q5U3C3 297 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZNF470Q6ECI4 717 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 CEACAM20Q6UY09 585 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ADGRF3Q8IZF5 1079 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 ZBTB2Q8N680 514 aa9.19□□□□□ -0.94
CLK4-209ENST00000521621 OR52E1Q8NGJ3 308 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms