RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 APOA4P06727 396 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 SNRPAP09012 282 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 VCLP18206 1134 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 XRCC1P18887 633 aaPredicted RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 ATP5DP30049 168 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 SKIV2L2P42285 1042 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 KCNC1P48547 511 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 LIMK1P53667 647 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 ATXN3P54252 364 aaPredicted RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 ABRQ12979 859 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 SLC14A1Q13336 389 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 NEK10Q6ZWH5 1172 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 CLEC14AQ86T13 490 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 KIAA2013Q8IYS2 634 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 SPATA6LQ8N4H0 392 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 PHC3Q8NDX5 983 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 OR5AR1Q8NGP9 310 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 TMEM159Q96B96 161 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 LINGO1Q96FE5 620 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 PDLIM5Q96HC4 596 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 APOLD1Q96LR9 279 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 C12orf66Q96MD2 445 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 GPR78Q96P69 363 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 MENTQ9BUN1 341 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 TSSK1BQ9BXA7 367 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 ROPN1BQ9BZX4 212 aaPredicted RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 UNKQ9C0B0 810 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 TWSG1Q9GZX9 223 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 ROPN1Q9HAT0 212 aaPredicted RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 IGSF5Q9NSI5 407 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 ZNF358Q9NW07 568 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 TXNDC16Q9P2K2 825 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 TRMT6Q9UJA5 497 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 ADAMTS6Q9UKP5 1117 aa9.65□□□□□ -0.86
CLN8-202ENST00000517514 SNRNP200O75643 2136 aaKnown RBP9.65□□□□□ -0.86
CLN8-202ENST00000517514 A0A096LPK6 155 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 TLDC2A0PJX2 215 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 NEMP2A6NFY4 417 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 PDZK1P1A8MUH7 402 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 ARHGEF33A8MVX0 844 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 F8W8V4 182 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 CDC7O00311 574 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 MAP2K7O14733 419 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 KPNA5O15131 536 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CDH16O75309 829 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 PSIP1O75475 530 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 KRT38O76015 456 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 MPC1LP0DKB6 136 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CBSLP0DN79 551 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 MTHFD1P11586 935 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 CREB1P16220 341 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 STMN1P16949 149 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CNTFP26441 200 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CBSP35520 551 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 FASLGP48023 281 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 SERPINB8P50452 374 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 ILF2Q12905 390 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 TMED2Q15363 201 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 ZXDCQ2QGD7 858 aaPredicted RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 SYTL3Q4VX76 610 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 C14orf28Q4W4Y0 310 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 PERM1Q5SV97 790 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 UGT3A1Q6NUS8 523 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 ZCCHC8Q6NZY4 707 aaKnown RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 SBSNQ6UWP8 590 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 LRIG3Q6UXM1 1119 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 ZNF438Q7Z4V0 828 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 NAXDQ8IW45 347 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 LMNTD1Q8N9Z9 388 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 KCTD4Q8WVF5 259 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 JPH3Q8WXH2 748 aaPredicted RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 ASB11Q8WXH4 323 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 TFGQ92734 400 aaPredicted RBP9.64□□□□□ -0.87
CLN8-202ENST00000517514 PTERQ96BW5 349 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 NXNL1Q96CM4 212 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CCDC77Q9BR77 488 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 PPCSQ9HAB8 311 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 GPAMQ9HCL2 828 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CPNE7Q9UBL6 633 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 RNF215Q9Y6U7 377 aa9.64□□□□□ -0.87
CLN8-202ENST00000517514 CEP250Q9BV73 2442 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 KIR2DS5A0A0G2JLQ3 304 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 A0A0G2JNG1 304 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 KIR2DS3K7RE56 304 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 FLRT2O43155 660 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 ZBTB14O43829 449 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 FOXD2O60548 495 aaPredicted RBP9.63□□□□□ -0.87
CLN8-202ENST00000517514 KRT37O76014 449 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 C1orf105O95561 183 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 SBK3P0C264 359 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 SLC35G4P0C7Q5 338 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 CCDC166P0CW27 439 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
CLN8-202ENST00000517514 CD1DP15813 335 aa9.63□□□□□ -0.87
CLN8-202ENST00000517514 CRABP2P29373 138 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms