RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 CHRNGP07510 517 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 ALOX15P16050 662 aaPredicted RBP15.65■□□□□ 0.1
NUP54-214ENST00000514307 IGFALSP35858 605 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 GGT5P36269 586 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 CXCL12P48061 93 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 PTK2BQ14289 1009 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 SH2D4BQ5SQS7 431 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 METRNLQ641Q3 311 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 CRTC3Q6UUV7 619 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 EPGNQ6UW88 154 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 MAMSTRQ6ZN01 415 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 YTHDF3Q7Z739 585 aaKnown RBP15.65■□□□□ 0.1
NUP54-214ENST00000514307 CUZD1Q86UP6 607 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 GALNT13Q8IUC8 556 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 VRK3Q8IV63 474 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 ZNF547Q8IVP9 402 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 SPNS2Q8IVW8 549 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 PJA1Q8NG27 643 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 CFAP61Q8NHU2 1237 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 ZNF483Q8TF39 744 aaPredicted RBP15.65■□□□□ 0.1
NUP54-214ENST00000514307 STON2Q8WXE9 905 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 ATP6V1E2Q96A05 226 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 RHBDF1Q96CC6 855 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 TIMM29Q9BSF4 260 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 WWOXQ9NZC7 414 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 OPTCQ9UBM4 332 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 FAM8A1Q9UBU6 413 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 MARCOQ9UEW3 520 aaPredicted RBP15.65■□□□□ 0.1
NUP54-214ENST00000514307 MOSPD1Q9UJG1 213 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 COL4A2P08572 1712 aa15.65■□□□□ 0.1
NUP54-214ENST00000514307 IFRD1O00458 451 aaPredicted RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 KATNA1O75449 491 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 FSBPO95073 299 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 CHEK2O96017 543 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 CEACAM5P06731 702 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 RPS17P08708 135 aaKnown RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 RABIFP47224 123 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 IDH3AP50213 366 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 THOP1P52888 689 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 CDH13P55290 713 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 PPP2CBP62714 309 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 PPP2CAP67775 309 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 CDC16Q13042 620 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 GAS6Q14393 721 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 RBBP7Q16576 425 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 PHKG1Q16816 387 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 ZNF658BQ4V348 819 aaPredicted RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 UNC5DQ6UXZ4 953 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 SLC36A4Q6YBV0 504 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 ACAD11Q709F0 780 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 DCP2Q8IU60 420 aaKnown RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 RASGRP3Q8IV61 690 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 OXR1Q8N573 874 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 TRPC4APQ8TEL6 797 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 UBTD2Q8WUN7 234 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 FBXL8Q96CD0 374 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 SCARF2Q96GP6 870 aaPredicted RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 MAGEB10Q96LZ2 347 aaPredicted RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 WDR92Q96MX6 357 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 CCT7Q99832 543 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 GPR174Q9BXC1 333 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 COL25A1Q9BXS0 654 aaPredicted RBP15.64■□□□□ 0.09
NUP54-214ENST00000514307 SLC32A1Q9H598 525 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 MID1IP1Q9NPA3 183 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 MRGBPQ9NV56 204 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 PCTPQ9UKL6 214 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 TRIM33Q9UPN9 1127 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 A0A0C4DFX4 3053 aa15.64■□□□□ 0.09
NUP54-214ENST00000514307 K7EPI3 171 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 DLL1O00548 723 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 TAPBPO15533 448 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 DIAPH2O60879 1101 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 ESRRBO95718 433 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 OTCP00480 354 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 EPB42P16452 691 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 IDSP22304 550 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 MPSTP25325 297 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 ARRB2P32121 409 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 HSD17B2P37059 387 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 PREPP48147 710 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 DMPKQ09013 629 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 GTF2H2Q13888 395 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 NFATC4Q14934 902 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 USP39Q53GS9 565 aaKnown RBP15.63■□□□□ 0.09
NUP54-214ENST00000514307 SPDYAQ5MJ70 313 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 GTF2H2CQ6P1K8 395 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 C11orf96Q7Z7L8 435 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 CADM4Q8NFZ8 388 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 CCT6BQ92526 530 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 DLG3Q92796 817 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 MOCOSQ96EN8 888 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 BMFQ96LC9 184 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 HHIPQ96QV1 700 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 CCDC28BQ9BUN5 200 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 SHCBP1LQ9BZQ2 653 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 SEMA4BQ9NPR2 832 aaPredicted RBP15.63■□□□□ 0.09
NUP54-214ENST00000514307 GPSM3Q9Y4H4 160 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 CKAP5Q14008 2032 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 F5P12259 2224 aa15.63■□□□□ 0.09
NUP54-214ENST00000514307 CUL9Q8IWT3 2517 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms