RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DTX3LQ8TDB6 740 aa19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 BLOC1S5Q8TDH9 187 aa19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 PITPNM3Q9BZ71 974 aa19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 FAM60AQ9NP50 221 aa19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 IFT80Q9P2H3 777 aaPredicted RBP19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 COPG2Q9UBF2 871 aa19.67■□□□□ 0.74
SQSTM1-215ENST00000514093 FER1L5A0AVI2 2057 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 A0A087X0T9 212 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 A0A0A6YYK5 440 aaPredicted RBP19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 MATN2O00339 956 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 HCRTR1O43613 425 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 PROSCO94903 275 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 CTSBP07858 339 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 FAM228BP0C875 321 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 EDN3P14138 238 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 WNT3AP56704 352 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 SOX8P57073 446 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 ITGA9Q13797 1035 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 SLC14A2Q15849 920 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 CYP2A13Q16696 494 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 DEFB110Q30KQ9 67 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 TEX44Q53QW1 395 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 ZDHHC20Q5W0Z9 365 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 GPR135Q8IZ08 494 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 OR2Y1Q8NGV0 311 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 ZNF398Q8TD17 642 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 FAR1Q8WVX9 515 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 N4BP2L2Q92802 583 aaPredicted RBP19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 PTERQ96BW5 349 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 CNDP1Q96KN2 507 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 GBP5Q96PP8 586 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 TRABDQ9H4I3 376 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 XKR8Q9H6D3 395 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 DHCR7Q9UBM7 475 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 NDOR1Q9UHB4 597 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 ITGB1BP2Q9UKP3 347 aa19.66■□□□□ 0.74
SQSTM1-215ENST00000514093 LOC285095A0A1B0GVY8 99 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 OR2B3O76000 313 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 UMODP07911 640 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 DCDP81605 110 aaKnown RBP19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 CDC16Q13042 620 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 PDK1Q15118 436 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 ZXDCQ2QGD7 858 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 GLT6D1Q7Z4J2 308 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 TRIM73Q86UV7 250 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 PHC3Q8NDX5 983 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 C17orf62Q9BQA9 187 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 RUBCNLQ9H714 662 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 LMBRD1Q9NUN5 540 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 CTTNBP2NLQ9P2B4 639 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 CELSR1Q9NYQ6 3014 aa19.65■□□□□ 0.74
SQSTM1-215ENST00000514093 ZGRF1Q86YA3 2104 aa19.64■□□□□ 0.74
SQSTM1-215ENST00000514093 AKAP9Q99996 3911 aa19.64■□□□□ 0.74
SQSTM1-215ENST00000514093 LRRD1A4D1F6 860 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 APOL1O14791 398 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 SGTAO43765 313 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 SNRPB2P08579 225 aaKnown RBP19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 PTPN3P26045 913 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 CD68P34810 354 aaPredicted RBP19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 DYNLT1P63172 113 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 SLC9A4Q6AI14 798 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 KDELC1Q6UW63 502 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 PPP4R1Q8TF05 950 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 RBM41Q96IZ5 413 aaKnown RBP19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 TEKT5Q96M29 485 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 OLFM3Q96PB7 478 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 SMOXQ9NWM0 555 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 FAM153AQ9UHL3 310 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 PKP3Q9Y446 797 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 HEBP2Q9Y5Z4 205 aa19.64■□□□□ 0.73
SQSTM1-215ENST00000514093 SVILO95425 2214 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 A0A1W2PQJ5 194 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 CCDC78A2IDD5 438 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 H3BMH7 237 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 AGPSO00116 658 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 PPP1R12AO14974 1030 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 PRAMEF1O95521 474 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 STSP08842 583 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 NFKB1P19838 968 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 TSFMP43897 325 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 AIMP2Q13155 320 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 PRKG2Q13237 762 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 ZNF169Q14929 603 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 ZIC1Q15915 447 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 FILIP1LQ4L180 1135 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 RHBDD2Q6NTF9 364 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 ALKBH5Q6P6C2 394 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 ZNF655Q8N720 491 aaPredicted RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 OR52E1Q8NGJ3 308 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 MAK16Q9BXY0 300 aaKnown RBP19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 SLC6A20Q9NP91 592 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 ACTR10Q9NZ32 417 aa19.63■□□□□ 0.73
SQSTM1-215ENST00000514093 A0A1B0GUH1 482 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 HEATR9A2RTY3 570 aa19.62■□□□□ 0.73
SQSTM1-215ENST00000514093 C2orf74A8MZ97 194 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms