RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ASPSCR1Q9BZE9 553 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 AKAP7Q9P0M2 348 aaPredicted RBP9.45□□□□□ -0.9
RNF4-221ENST00000513643 MED16Q9Y2X0 877 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 SEC16AO15027 2179 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 BSNQ9UPA5 3926 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 PIEZO2Q9H5I5 2752 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
RNF4-221ENST00000513643 EFCAB7A8K855 629 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 IQCF5A8MTL0 148 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 A8MU76 341 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 GOLGA8MH3BSY2 632 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 SMAPO00193 183 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 BTN3A3O00478 584 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 MSL3P1P0C860 447 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 LIPCP11150 499 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 FGF5P12034 268 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 ABCG1P45844 678 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 MAPK9P45984 424 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 KPNA2P52292 529 aaKnown RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 RAB15P59190 212 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 GRB7Q14451 532 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TGIF1Q15583 401 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 ZNF789Q5FWF6 425 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TMEM164Q5U3C3 297 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 ANKS6Q68DC2 871 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 MRNIPQ6NTE8 343 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 HIBCHQ6NVY1 386 aaPredicted RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 KLHL35Q6PF15 583 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 FOXR1Q6PIV2 292 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 NAPRTQ6XQN6 538 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 LRRC69Q6ZNQ3 347 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 PCGF5Q86SE9 256 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 ZFAND4Q86XD8 727 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 KMT5CQ86Y97 462 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 JAMLQ86YT9 394 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 IGDCC3Q8IVU1 814 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 LMNTD2Q8IXW0 634 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 ADGRF3Q8IZF5 1079 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 C17orf53Q8N3J3 647 aaPredicted RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 D2HGDHQ8N465 521 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 OR52E1Q8NGJ3 308 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 OR5K2Q8NHB8 316 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 JPH3Q8WXH2 748 aaPredicted RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 ELMO1Q92556 727 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 UBXN4Q92575 508 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 ART4Q93070 314 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 CAPZA3Q96KX2 299 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 DCBLD2Q96PD2 775 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TGM7Q96PF1 710 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TEFMQ96QE5 360 aaKnown RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 CHRNA10Q9GZZ6 450 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 APMAPQ9HDC9 416 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 HRASLS2Q9NWW9 162 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 SLC39A1Q9NY26 324 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 PILRAQ9UKJ1 303 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 POMT2Q9UKY4 750 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
RNF4-221ENST00000513643 SDK2Q58EX2 2172 aa9.44□□□□□ -0.9
RNF4-221ENST00000513643 TLN1Q9Y490 2541 aaKnown RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 OR6C74A6NCV1 312 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 TLCD2A6NGC4 264 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 GOLGA8KD6RF30 607 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 E7ESA3 106 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 F8W8V4 182 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 K7ENP7 123 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 IFRD1O00458 451 aaPredicted RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 KLK10O43240 276 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 SEC31AO94979 1220 aaKnown RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 DLGAP3O95886 979 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 ESR1P03372 595 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 MAPK10P53779 464 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 UCNP55089 124 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 SH3BP2P78314 561 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 DR1Q01658 176 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 DHX34Q14147 1143 aaKnown RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 FRG1Q14331 258 aaKnown RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 IL11RAQ14626 422 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 MORF4L2Q15014 288 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 PPP1R7Q15435 360 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 SNAP47Q5SQN1 464 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 PLEKHS1Q5SXH7 462 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 DCAF12Q5T6F0 453 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 CACHD1Q5VU97 1274 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 ZNF549Q6P9A3 640 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 INO80CQ6PI98 192 aaPredicted RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 TIPARPQ7Z3E1 657 aaKnown RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
RNF4-221ENST00000513643 CNTN4Q8IWV2 1026 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 KRT222Q8N1A0 295 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 OR4E2Q8NGC2 313 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 OR5AR1Q8NGP9 310 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 ASZ1Q8WWH4 475 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 NKD1Q969G9 470 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 FCRL4Q96PJ5 515 aa9.43□□□□□ -0.9
RNF4-221ENST00000513643 FERD3LQ96RJ6 166 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms