RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 ATP4BP51164 291 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 INHBCP55103 352 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 SNRPD1P62314 119 aaKnown RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 MXD1Q05195 221 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 TARBP2Q15633 366 aaKnown RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CCDC157Q569K6 752 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 XKRXQ6PP77 449 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ZNF671Q8TAW3 534 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 LINGO1Q96FE5 620 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 MLPHQ9BV36 600 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ITM2CQ9NQX7 267 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 PAK1IP1Q9NWT1 392 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 MOCS1Q9NZB8 636 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CPQQ9Y646 472 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 CD72P21854 359 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ERVK-8P63133 956 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 SP2Q02086 613 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 MBTD1Q05BQ5 628 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 RABL3Q5HYI8 236 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 GPR65Q8IYL9 337 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 C9orf43Q8TAL5 461 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 BTN2A2Q8WVV5 523 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 NACC2Q96BF6 587 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 SEMA3CQ99985 751 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 TTYH1Q9H313 450 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 AMBNQ9NP70 447 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 PAQR5Q9NXK6 330 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 ARL15Q9NXU5 204 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 RNF6Q9Y252 685 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 NCKAP1Q9Y2A7 1128 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 HSPB11Q9Y547 144 aa11.08□□□□□ -0.64
TCOF1-211ENST00000513346 MAP1BP46821 2468 aaKnown RBP11.08□□□□□ -0.64
TCOF1-211ENST00000513346 UBE2QL1A1L167 161 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 A8MV72 311 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 TBL1XO60907 577 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PSKH1P11801 424 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 IFNGR2P38484 337 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SLC1A2P43004 574 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 HERVK_113P63132 956 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CYP4F8P98187 520 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SETMARQ53H47 684 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ATAD1Q8NBU5 361 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 GRIN3AQ8TCU5 1115 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SLC13A3Q8WWT9 602 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 TFAP2CQ92754 450 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LGALS12Q96DT0 336 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 FCRL2Q96LA5 508 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 FRMD6Q96NE9 622 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CGREF1Q99674 301 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ERVK-6Q9BXR3 956 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ANKRA2Q9H9E1 313 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CMTM6Q9NX76 183 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ZNHIT2Q9UHR6 403 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 HEMK1Q9Y5R4 338 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MPZL2O60487 215 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 IFNA7P01567 189 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CPOXP36551 454 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 STX4Q12846 297 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PPP1R8Q12972 351 aaKnown RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 RUNDC3AQ59EK9 446 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PPP2R2DQ66LE6 453 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 KIAA0930Q6ICG6 404 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SPATA22Q8NHS9 363 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MED8Q96G25 268 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 TRNT1Q96Q11 434 aaKnown RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SMURF2Q9HAU4 748 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LRTM1Q9HBL6 345 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ANKMY1Q9P2S6 941 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 GRIP1Q9Y3R0 1128 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PRAMEF33A0A0G2JMD5 474 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 hCG_2039718K7EN88 272 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PRAMEF10O60809 474 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 IFNA16P05015 189 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 FUT4P22083 530 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 RFC2P35250 354 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MAPK8P45983 427 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 RFX3P48380 749 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ATP12AP54707 1039 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 UGT2B15P54855 530 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PTSQ03393 145 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 KCNAB2Q13303 367 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MAB21L1Q13394 359 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 C7orf61Q8IZ16 206 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CLHC1Q8NHS4 586 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 CRELD1Q96HD1 420 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SH3YL1Q96HL8 342 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LRATO95237 230 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SLC10A3P09131 477 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 LAG3P18627 525 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 GTF2E2P29084 291 aaKnown RBP11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PCSK6P29122 969 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 GRIA2P42262 883 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 ASPAP45381 313 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 PTPN5P54829 565 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 SMIM11AP58511 58 aa11.07□□□□□ -0.64
TCOF1-211ENST00000513346 MAXP61244 160 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms