RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 JPH3Q8WXH2 748 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 LPGAT1Q92604 370 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 PEX13Q92968 403 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 STAMBPL1Q96FJ0 436 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CFAP36Q96G28 342 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 C9orf72Q96LT7 481 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 BIRC8Q96P09 236 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 TGM7Q96PF1 710 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 COPS8Q99627 209 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 MCMBPQ9BTE3 642 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 TUBB2BQ9BVA1 445 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ASPSCR1Q9BZE9 553 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 EPB41L4BQ9H329 900 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 WASH6PQ9NQA3 447 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 POT1Q9NUX5 634 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 IMP3Q9NV31 184 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 OCIAD1Q9NX40 245 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 FOXJ2Q9P0K8 574 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 ZNF624Q9P2J8 865 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 PSAT1Q9Y617 370 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 FAM169AQ9Y6X4 670 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 CACNA1GO43497 2377 aa8.55□□□□□ -1.04
PDLIM5-213ENST00000509357 MGAT4DA6NG13 374 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 LILRA5A6NI73 299 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 STMND1H3BQB6 276 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CD3EAPO15446 510 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 S1PR4O95977 384 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC35G4P0C7Q5 338 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 FGF3P11487 239 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 PGAM1P18669 254 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 GMPRP36959 345 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC1A2P43004 574 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 PRLHRP49683 370 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SEPHS1P49903 392 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 ATP1A2P50993 1020 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 RAB15P59190 212 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 FOXM1Q08050 763 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CTBP1Q13363 440 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 GPR18Q14330 331 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CLCA4Q14CN2 919 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 RPE65Q16518 533 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SKIDA1Q1XH10 827 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 GPR33Q49SQ1 333 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 BCL7AQ4VC05 210 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SOWAHCQ53LP3 525 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 IRGCQ6NXR0 463 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CASC4Q6P4E1 433 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 KLHL35Q6PF15 583 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CNSTQ6PJW8 725 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 PACS1Q6VY07 963 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CAPN12Q6ZSI9 719 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 PCGF5Q86SE9 256 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CILP2Q8IUL8 1156 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 VRK3Q8IV63 474 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CFAP206Q8IYR0 622 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 KRT222Q8N1A0 295 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CEP112Q8N8E3 955 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SPDYE1Q8NFV5 336 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 GPR150Q8NGU9 434 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 OR6P1Q8NGX9 317 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 GIMAP7Q8NHV1 300 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 HEXDCQ8WVB3 486 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 ZDHHC12Q96GR4 267 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CTRCQ99895 268 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 TXLNGYQ9BZA5 131 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 WWP1Q9H0M0 922 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 VPS37BQ9H9H4 285 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 UCK1Q9HA47 277 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SLC40A1Q9NP59 571 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SAYSD1Q9NPB0 183 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 FBXO6Q9NRD1 293 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 MOCS1Q9NZB8 636 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 ACSL5Q9ULC5 683 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CDYLQ9Y232 598 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 B3GALT1Q9Y5Z6 326 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 CFAP20Q9Y6A4 193 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 MAD1L1Q9Y6D9 718 aa8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 V9GYY5 206 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 SNRNP200O75643 2136 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-213ENST00000509357 KIF26BQ2KJY2 2108 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 KLHL33A6NCF5 533 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 KRT87PA6NCN2 255 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 B4E171 279 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 POLR1CO15160 346 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 NIPSNAP2O75323 286 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 HAUS5O94927 633 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ATP1B2P14415 290 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 ITGB6P18564 788 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 PDHA2P29803 388 aa8.53□□□□□ -1.04
PDLIM5-213ENST00000509357 TSPAN7P41732 249 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms