RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ACSL5Q9ULC5 683 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 ACTL7BQ9Y614 415 aa13.87□□□□□ -0.19
RNF4-208ENST00000507247 PDZK1P1A8MUH7 402 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 HMGB1P1B2RPK0 211 aaPredicted RBP13.86□□□□□ -0.19
RNF4-208ENST00000507247 COPEO14579 308 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 TYROBPO43914 113 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 GLRA3O75311 464 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 MATN4O95460 622 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 TFEBP19484 476 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 EPHA8P29322 1005 aaPredicted RBP13.86□□□□□ -0.19
RNF4-208ENST00000507247 ABRQ12979 859 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 ELOCQ15369 112 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 OR4D1Q15615 310 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 UAP1L1Q3KQV9 507 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 C16orf46Q6P387 395 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 WASH2PQ6VEQ5 465 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 KANSL1Q7Z3B3 1105 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 SKA2Q8WVK7 121 aaPredicted RBP13.86□□□□□ -0.19
RNF4-208ENST00000507247 DLG3Q92796 817 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 INSM2Q96T92 566 aaPredicted RBP13.86□□□□□ -0.19
RNF4-208ENST00000507247 WASH6PQ9NQA3 447 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 TMEM216Q9P0N5 145 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 GMEB2Q9UKD1 530 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 ADAMTS6Q9UKP5 1117 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 PCOLCE2Q9UKZ9 415 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 EMCNQ9ULC0 261 aa13.86□□□□□ -0.19
RNF4-208ENST00000507247 CFAP20Q9Y6A4 193 aaKnown RBP13.86□□□□□ -0.19
RNF4-208ENST00000507247 BTN3A1O00481 513 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 KHNYNO15037 678 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 YY2O15391 372 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 PSIP1O75475 530 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 CER1O95813 267 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 SYPP08247 313 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 GSTA1P08263 222 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 SLC35G4P0C7Q5 338 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 GIMD1P0DJR0 217 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 F3P13726 295 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ENGP17813 658 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 CRHR1P34998 444 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 BDKRB1P46663 353 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 KCNC1P48547 511 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ARRB1P49407 418 aaPredicted RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 ATP6V0D1P61421 351 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 TSNQ15631 228 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 FAM83EQ2M2I3 478 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 TSNAXIP1Q2TAA8 658 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 TECRLQ5HYJ1 363 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 AGAP9Q5VTM2 703 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 DUS1LQ6P1R4 473 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 LVRNQ6Q4G3 990 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 IL27RAQ6UWB1 636 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ABRAXAS1Q6UWZ7 409 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ISCA2Q86U28 154 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 GKN2Q86XP6 184 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 GATAD2AQ86YP4 633 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 NAGSQ8N159 534 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 SLC25A45Q8N413 288 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 CFAP61Q8NHU2 1237 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 PATE1Q8WXA2 126 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ASB11Q8WXH4 323 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 PKNOX2Q96KN3 472 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 C12orf66Q96MD2 445 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 GTPBP2Q9BX10 602 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 ALG9Q9H6U8 611 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 NMRAL1Q9HBL8 299 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
RNF4-208ENST00000507247 SLC17A7Q9P2U7 560 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 DCDC2Q9UHG0 476 aa13.85□□□□□ -0.19
RNF4-208ENST00000507247 TRBV23OR9-2A0A075B6M9 112 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 PRAMEF33A0A0G2JMD5 474 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 LNP1A1A4G5 178 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 KRT87PA6NCN2 255 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 OR52A4PA6NMU1 304 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ARHGEF33A8MVX0 844 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 LMO7DNF2Z398 122 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 GFYI3L273 518 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 TK2O00142 265 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 DFNA5O60443 496 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 LMNAP02545 664 aaKnown RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 SBK3P0C264 359 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ZNF806P0C7X5 589 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 CCT5P48643 541 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 CCT8P50990 548 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 SPEM2Q0P670 501 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 MPP2Q14168 576 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 ACAP2Q15057 778 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 SF3A2Q15428 464 aaKnown RBP13.84□□□□□ -0.19
RNF4-208ENST00000507247 RPE65Q16518 533 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 PHKG1Q16816 387 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 DEFB133Q30KQ1 61 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 LCA5Q86VQ0 697 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 TMEM151AQ8N4L1 468 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 MINDY1Q8N5J2 469 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 PHC3Q8NDX5 983 aa13.84□□□□□ -0.19
RNF4-208ENST00000507247 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms