RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 PDHA2P29803 388 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 RORAP35398 523 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 LMAN1P49257 510 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 PRLHRP49683 370 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 CDKN1CP49918 316 aaPredicted RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 PRKG2Q13237 762 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 PRPSAP1Q14558 356 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ESPL1Q14674 2120 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 PTCHD3Q3KNS1 767 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 C4orf17Q53FE4 359 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ZNF789Q5FWF6 425 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 PAPD7Q5XG87 772 aaKnown RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 DENND5AQ6IQ26 1287 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 C11orf63Q6NUN7 778 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 DARS2Q6PI48 645 aaKnown RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 SNX20Q7Z614 316 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 TC2NQ8N9U0 490 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 GALNT11Q8NCW6 608 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 CCDC110Q8TBZ0 833 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 HM13Q8TCT9 377 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ULK4Q96C45 1275 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 NLNQ9BYT8 704 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 COG4Q9H9E3 785 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 ACTR5Q9H9F9 607 aaPredicted RBP11.04□□□□□ -0.64
SIL1-208ENST00000505945 PCMTD2Q9NV79 361 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 SERTAD3Q9UJW9 196 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 MAP4K5Q9Y4K4 846 aa11.04□□□□□ -0.64
SIL1-208ENST00000505945 A6NL46 340 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 MATN2O00339 956 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 BTN3A1O00481 513 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 ZNF185O15231 689 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 LDB2O43679 373 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 AGFG2O95081 481 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 PRSS56P0CW18 603 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 CYP2A7P20853 494 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 CTNNA2P26232 953 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 MC4RP32245 332 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 HADHAP40939 763 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 ITGA1P56199 1179 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 COPS2P61201 443 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 HIST2H2BCQ6DN03 193 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 AADACL2Q6P093 401 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 CDKL3Q8IVW4 592 aaPredicted RBP11.03□□□□□ -0.64
SIL1-208ENST00000505945 SYTL1Q8IYJ3 562 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 CLDN19Q8N6F1 224 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 FDCSPQ8NFU4 85 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 OR52E1Q8NGJ3 308 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 HEXDCQ8WVB3 486 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 DNAJC1Q96KC8 554 aaKnown RBP11.03□□□□□ -0.64
SIL1-208ENST00000505945 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 NUDT9Q9BW91 350 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 PITPNM3Q9BZ71 974 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 OSBPL8Q9BZF1 889 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 SLC7A5P2Q9GIP4 190 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 OR52A5Q9H2C5 316 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 TSPY26PQ9H489 355 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 TFB2MQ9H5Q4 396 aaKnown RBP11.03□□□□□ -0.64
SIL1-208ENST00000505945 XKR8Q9H6D3 395 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 ARNT2Q9HBZ2 717 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 SYTL2Q9HCH5 934 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 ZDHHC3Q9NYG2 299 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 LUZP4Q9P127 313 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 ZNF451Q9Y4E5 1061 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 PCDHA3Q9Y5H8 950 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 SHANK1Q9Y566 2161 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 UNC79Q9P2D8 2635 aa11.03□□□□□ -0.64
SIL1-208ENST00000505945 IGLV3-16A0A075B6K0 115 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 IFRD1O00458 451 aaPredicted RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 PJA2O43164 708 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 MAP3K7O43318 606 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 ZNF749O43361 778 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 CEACAM4O75871 244 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 STK10O94804 968 aaKnown RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 SORBS2O94875 1100 aaKnown RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 TPH1P17752 444 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 PTMSP20962 102 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 CTNNA1P35221 906 aaKnown RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 VAV2P52735 878 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 SPA17Q15506 151 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 INPP5JQ15735 1006 aaPredicted RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 GPR33Q49SQ1 333 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 ZNF658BQ4V348 819 aaPredicted RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 ZRANB3Q5FWF4 1079 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 FHL5Q5TD97 284 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 JMJD6Q6NYC1 403 aaPredicted RBP11.02□□□□□ -0.65
SIL1-208ENST00000505945 SARM1Q6SZW1 724 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 FAM198BQ6UWH4 519 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 CDHR3Q6ZTQ4 885 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 TAS2R42Q7RTR8 314 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 SERPINA9Q86WD7 417 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 AMIGO1Q86WK6 493 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 ADGRF3Q8IZF5 1079 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 ZBTB2Q8N680 514 aa11.02□□□□□ -0.65
SIL1-208ENST00000505945 TFGQ92734 400 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms