RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 HOXC4P09017 264 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 ACP5P13686 325 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PDHA2P29803 388 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RPS9P46781 194 aaKnown RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 GNPDA1P46926 289 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CXCL12P48061 93 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 HSPA7P48741 367 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PXNP49023 591 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 HNMTP50135 292 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 IDH3AP50213 366 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 THOP1P52888 689 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 AP1S2P56377 157 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 KIAA1024LP59773 190 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CDKL1Q00532 357 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 GALNT1Q10472 559 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 LCP2Q13094 533 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 MTAPQ13126 283 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RPA4Q13156 261 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 GTF2H2Q13888 395 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 NFE2L1Q14494 772 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PCBP2Q15366 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PDCD2Q16342 344 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CDKL4Q5MAI5 379 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 VWA5B1Q5TIE3 1220 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 GTF2H2CQ6P1K8 395 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TTC23LQ6PF05 361 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 ENPP7Q6UWV6 458 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 MBOAT1Q6ZNC8 495 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 ATG14Q6ZNE5 492 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CHST15Q7LFX5 561 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TRPM8Q7Z2W7 1104 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RD3Q7Z3Z2 195 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CLYBLQ8N0X4 340 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TCAIMQ8N3R3 496 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 FAM160A2Q8N612 972 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TEX9Q8N6V9 391 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PDPRQ8NCN5 879 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 OR56A4Q8NGH8 313 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 ZNF483Q8TF39 744 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RLN3Q8WXF3 142 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 SNX19Q92543 992 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CLDN23Q96B33 292 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RHBDF1Q96CC6 855 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PPP1R36Q96LQ0 422 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 RMDN2Q96LZ7 410 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CCDC138Q96M89 665 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 WDR92Q96MX6 357 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 LRRC37BQ96QE4 947 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CD244Q9BZW8 370 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 OSGEPL1Q9H4B0 414 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TM7SF3Q9NS93 570 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 KLC4Q9NSK0 619 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 DNAJC28Q9NX36 388 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 WSB2Q9NYS7 404 aaPredicted RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 OPTCQ9UBM4 332 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 SLC23A2Q9UGH3 650 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PTBP2Q9UKA9 531 aaKnown RBP6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PCTPQ9UKL6 214 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 SUFUQ9UMX1 484 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 PSMD13Q9UNM6 376 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 INVSQ9Y283 1065 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 SLC17A4Q9Y2C5 497 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 STK38LQ9Y2H1 464 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 TRAF6Q9Y4K3 522 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 HS3ST3A1Q9Y663 406 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 REV3LO60673 3130 aa6.95□□□□□ -1.3
GPATCH4-209ENST00000498641 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 IGHV1OR15-9A0A0B4J2B8 117 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 GOLGA8QA0A0J9YX86 632 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 GOLGA8OA6NCC3 632 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 ARHGEF33A8MVX0 844 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 TMEM233B4DJY2 109 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 GOLGA8NF8WBI6 632 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 H0Y8X5 98 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 K7EPI3 171 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 MATN2O00339 956 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 IFRD1O00458 451 aaPredicted RBP6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 E2F3O00716 465 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 PPP6CO00743 305 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 UBFD1O14562 309 aaKnown RBP6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 AZIN1O14977 448 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 SCAMP1O15126 338 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 MAP3K13O43283 966 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 LATO43561 262 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 CCDC22O60826 627 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 KCNJ13O60928 360 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 STK16O75716 305 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 CHEK2O96017 543 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 RPN2P04844 631 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 IGHV4-34P06331 123 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 RPS17P08708 135 aaKnown RBP6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 SLC35G4P0C7Q5 338 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 EPB42P16452 691 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 IDSP22304 550 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 SERPINB3P29508 390 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 NUDT1P36639 197 aa6.94□□□□□ -1.3
GPATCH4-209ENST00000498641 GDF5P43026 501 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms