RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 PAPD5Q8NDF8 572 aaKnown RBP4.13□□□□□ -1.75
PTPRK-215ENST00000498284 KLHDC9Q8NEP7 349 aa4.13□□□□□ -1.75
PTPRK-215ENST00000498284 OR2AJ1Q8NGZ0 328 aa4.13□□□□□ -1.75
PTPRK-215ENST00000498284 ZFAND2BQ8WV99 257 aa4.13□□□□□ -1.75
PTPRK-215ENST00000498284 PGAP3Q96FM1 320 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-215ENST00000498284 ABHD6Q9BV23 337 aa4.13□□□□□ -1.75
PTPRK-215ENST00000498284 GDE1Q9NZC3 331 aa4.13□□□□□ -1.75
PTPRK-215ENST00000498284 ZHX1Q9UKY1 873 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-215ENST00000498284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPRK-215ENST00000498284 SPIN1Q9Y657 262 aaPredicted RBP4.13□□□□□ -1.75
PTPRK-215ENST00000498284 XRCC3O43542 346 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 DIAPH2O60879 1101 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 GGPS1O95749 300 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 IGKV3-20P01619 116 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 NR3C1P04150 777 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 MYBL1P10243 752 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 ANOS1P23352 680 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 DNASE1P24855 282 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 TIMP3P35625 211 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 PPP5CP53041 499 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 CDH13P55290 713 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 LINC01547P58512 204 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 RPS18P62269 152 aaKnown RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 PNRC1Q12796 327 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 SNTB1Q13884 538 aaKnown RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 NR1D2Q14995 579 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 PSMD6Q15008 389 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 SNAPC1Q16533 368 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 KYNUQ16719 465 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 WDR38Q5JTN6 314 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 C1orf141Q5JVX7 400 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 C6orf163Q5TEZ5 329 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 SLC27A1Q6PCB7 646 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 PLPPR4Q7Z2D5 763 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 OR6J1Q8NGC5 347 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 HES6Q96HZ4 224 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 FNDC11Q9BVV2 318 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 OR10A4Q9H209 315 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 DPAGT1Q9H3H5 408 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 GOLPH3LQ9H4A5 285 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 CRNNQ9UBG3 495 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 ANAPC2Q9UJX6 822 aa4.12□□□□□ -1.75
PTPRK-215ENST00000498284 TCF20Q9UGU0 1960 aaKnown RBP4.12□□□□□ -1.75
PTPRK-215ENST00000498284 TRBC2A0A5B9 178 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FAM72CH0Y354 149 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 TSPAN1O60635 241 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 MED24O75448 989 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 CAVIN2O95810 425 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 SP1P08047 785 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 ACP2P11117 423 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FGF5P12034 268 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 GNAZP19086 355 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 CPT2P23786 658 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 EEF1DP29692 281 aaKnown RBP4.11□□□□□ -1.75
PTPRK-215ENST00000498284 ALCAMQ13740 583 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 IL11RAQ14626 422 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FAM133BQ5BKY9 247 aaKnown RBP4.11□□□□□ -1.75
PTPRK-215ENST00000498284 TECRLQ5HYJ1 363 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 GRTP1Q5TC63 336 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FAM72AQ5TYM5 149 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FAM72DQ6L9T8 149 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 Q6ZTC4 211 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 TMEM173Q86WV6 379 aaPredicted RBP4.11□□□□□ -1.75
PTPRK-215ENST00000498284 FAM72BQ86X60 149 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 CPSF7Q8N684 471 aaKnown RBP4.11□□□□□ -1.75
PTPRK-215ENST00000498284 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 MOSPD2Q8NHP6 518 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 TEKT4Q8WW24 435 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 PGLYRP2Q96PD5 576 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 OLFM1Q99784 485 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 PELI2Q9HAT8 420 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 ACKR4Q9NPB9 350 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 OLFML3Q9NRN5 406 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 OSER1Q9NX31 292 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 HAO2Q9NYQ3 351 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 GIMAP2Q9UG22 337 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 ACAD8Q9UKU7 415 aa4.11□□□□□ -1.75
PTPRK-215ENST00000498284 ANKUB1A6NFN9 424 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 PRR32B1ATL7 298 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 H7C0S8 307 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 TADA2AO75478 443 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 TRUB2O95900 331 aaKnown RBP4.1□□□□□ -1.75
PTPRK-215ENST00000498284 EPHA2P29317 976 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 KRTAP24-1Q3LI83 254 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 CBWD6Q4V339 395 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 MDH1BQ5I0G3 518 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 CBWD3Q5JTY5 395 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 SFMBT2Q5VUG0 894 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 PLA2G4FQ68DD2 849 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 SLC35E4Q6ICL7 350 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 KRT80Q6KB66 452 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 LINGO4Q6UY18 593 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 DGLUCYQ7Z3D6 616 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 CAMKMTQ7Z624 323 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 ZNF329Q86UD4 541 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 PLD3Q8IV08 490 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 FAM114A1Q8IWE2 563 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 STPG4Q8N801 248 aa4.1□□□□□ -1.75
PTPRK-215ENST00000498284 TDRD5Q8NAT2 981 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms