RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 TFGQ92734 400 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 FAM136AQ96C01 138 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 CXorf40BQ96DE9 158 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 LINGO1Q96FE5 620 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 UBXN10Q96LJ8 280 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 TRIM54Q9BYV2 358 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 WWP1Q9H0M0 922 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 TRIT1Q9H3H1 467 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 CAB39LQ9H9S4 337 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 IL21RQ9HBE5 538 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 UCKL1Q9NWZ5 548 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 NOVA2Q9UNW9 492 aaKnown RBP17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 PLEKHM1Q9Y4G2 1056 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 ACTL7BQ9Y614 415 aa17.17■□□□□ 0.34
CTDSP1-215ENST00000498160 ADAMTS9Q9P2N4 1935 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 B4DGG1 531 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 PHGDHO43175 533 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 ZBTB14O43829 449 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 KLHL2O95198 593 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 WISP3O95389 354 aaPredicted RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 MATN4O95460 622 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 MTHFD1P11586 935 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 CYP2A7P20853 494 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 TGM1P22735 817 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 MAP4P27816 1152 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 ACADLP28330 430 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 FASLGP48023 281 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 KRT33BQ14525 404 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 DEFB133Q30KQ1 61 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 C14orf28Q4W4Y0 310 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 ACSBG2Q5FVE4 666 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 CMC1Q7Z7K0 106 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 SFRP1Q8N474 314 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 RMDN2Q96LZ7 410 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 C12orf66Q96MD2 445 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 RAB11FIP5Q9BXF6 653 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 UCK1Q9HA47 277 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 PRDM8Q9NQV8 689 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 DCDC2Q9UHG0 476 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 ASF1AQ9Y294 204 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 ST14Q9Y5Y6 855 aa17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 TDRD6O60522 2096 aaKnown RBP17.16■□□□□ 0.34
CTDSP1-215ENST00000498160 CDX4O14627 284 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 MAP2K7O14733 419 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 FFAR2O15552 330 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 GLRA3O75311 464 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 PSIP1O75475 530 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 RFPL1O75677 317 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 VIPP01282 170 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 CELA2BP08218 269 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 HIST1H2AGP0C0S8 130 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 CCDC166P0CW27 439 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 HIST1H2ADP20671 130 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 PDHA2P29803 388 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 CCT5P48643 541 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 IL9RQ01113 521 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 RPE65Q16518 533 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 XKR5Q6UX68 686 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 TRABD2AQ86V40 505 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 C17orf82Q86X59 251 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 DCUN1D3Q8IWE4 304 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 NAGSQ8N159 534 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 LILRA3Q8N6C8 439 aaPredicted RBP17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 ACVR1CQ8NER5 493 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 GPR156Q8NFN8 814 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 OR5K2Q8NHB8 316 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 MCOLN3Q8TDD5 553 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 EEF1AKMT1Q8WVE0 214 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 NAT6Q93015 286 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 RAD51AP1Q96B01 352 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 HIST1H2AHQ96KK5 128 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 SMC6Q96SB8 1091 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 SLC30A3Q99726 388 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 HIST1H2AJQ99878 128 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 H2AFJQ9BTM1 129 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 VPS11Q9H270 941 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 PARD6AQ9NPB6 346 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 MKS1Q9NXB0 559 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 GALPQ9UBC7 116 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 CTNNAL1Q9UBT7 734 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 OTOGLQ3ZCN5 2332 aa17.15■□□□□ 0.34
CTDSP1-215ENST00000498160 KNL1Q8NG31 2342 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 ZNF839A8K0R7 811 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 GFYI3L273 518 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 TSPAN12O95859 305 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 RBP1P09455 135 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 BRAFP15056 766 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 HSD17B2P37059 387 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 AP1S2P56377 157 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 GPS2Q13227 327 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 CSHL1Q14406 222 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 ACAP2Q15057 778 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 NR0B2Q15466 257 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 ASCL5Q7RTU5 278 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 GATAD2AQ86YP4 633 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 RHEBL1Q8TAI7 183 aa17.14■□□□□ 0.33
CTDSP1-215ENST00000498160 STAG3L4Q8TBR4 150 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms