RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ESRRBO95718 433 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 OTCP00480 354 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ENO1P06733 434 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RPS17P08708 135 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 NCF1P14598 390 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ITGB6P18564 788 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 NUDT1P36639 197 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 KCNC1P48547 511 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RPIAP49247 311 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 COPAP53621 1224 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 INHBCP55103 352 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SEMG2Q02383 582 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 TCF15Q12870 199 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 TMEM115Q12893 351 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 CST6Q15828 149 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 LSM12Q3MHD2 195 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 POM121L1PQ3SYA9 428 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SLC9B1Q4ZJI4 515 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 LRRC73Q5JTD7 316 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RAET1GQ6H3X3 334 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RABEPKQ7Z6M1 372 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SFTPA1Q8IWL2 248 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 CPSF7Q8N684 471 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 GIMAP7Q8NHV1 300 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RP9Q8TA86 221 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ZNF483Q8TF39 744 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ELMO1Q92556 727 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 FOXJ1Q92949 421 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PTCD3Q96EY7 689 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 MAELQ96JY0 434 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 MRGPRX1Q96LB2 322 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ACOX2Q99424 681 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SLC30A3Q99726 388 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 WRAP53Q9BUR4 548 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SHCBP1LQ9BZQ2 653 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 MTG2Q9H4K7 406 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SGK2Q9HBY8 427 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ZDHHC4Q9NPG8 344 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 ARL8BQ9NVJ2 186 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 USP36Q9P275 1121 aaKnown RBP10.06□□□□□ -0.8
HDAC3-214ENST00000495485 GALPQ9UBC7 116 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 OPTCQ9UBM4 332 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 SARDHQ9UL12 918 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 GPR34Q9UPC5 381 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PRSS21Q9Y6M0 314 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 PIKFYVEQ9Y2I7 2098 aa10.06□□□□□ -0.8
HDAC3-214ENST00000495485 C17orf113A0A1B0GUU1 675 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 PRR5-ARHGAP8B1AHC4 643 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 B2RBV5 119 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GPR89AB7ZAQ6 455 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 E9PBE3 544 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 UBDO15205 165 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 KLHL41O60662 606 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CIB2O75838 187 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CDK14O94921 469 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CBX6O95503 412 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CATP04040 527 aaKnown RBP10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GPR89BP0CG08 455 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 T-ENOLP0DO92 83 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 C6P13671 934 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 EPB42P16452 691 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GABRG2P18507 467 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 TEAD1P28347 426 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ARRB2P32121 409 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CCR7P32248 378 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 HOXD12P35452 270 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ARL1P40616 181 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-214ENST00000495485 P2RY2P41231 377 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 PRLHRP49683 370 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ATP4BP51164 291 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CCNG1P51959 295 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ARHGAP8P85298 464 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 BTKQ06187 659 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 HSPA14Q0VDF9 509 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 STX5Q13190 355 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 TUBB3Q13509 450 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 BOP1Q14137 746 aaKnown RBP10.05□□□□□ -0.8
HDAC3-214ENST00000495485 HERC3Q15034 1050 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ACSBG2Q5FVE4 666 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ANO7Q6IWH7 933 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GPRIN3Q6ZVF9 776 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 UBE2R2Q712K3 238 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-214ENST00000495485 PGBD3Q8N328 593 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 TEX9Q8N6V9 391 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 PRSS33Q8NF86 280 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 CADM4Q8NFZ8 388 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 MAGEC3Q8TD91 643 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GANCQ8TET4 914 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 UBTD2Q8WUN7 234 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
HDAC3-214ENST00000495485 GLMNQ92990 594 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 SCAMP4Q969E2 229 aa10.05□□□□□ -0.8
HDAC3-214ENST00000495485 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms