RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MVB12B	Q9H7P6	319 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	RDH14	Q9HBH5	336 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	KCNK9	Q9NPC2	374 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	IGSF5	Q9NSI5	407 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	TMEM74B	Q9NUR3	256 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	GULP1	Q9UBP9	304 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	FAM8A1	Q9UBU6	413 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	SLC23A2	Q9UGH3	650 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	RUVBL2	Q9Y230	463 aa	Known RBP	13.25	□□□□□ -0.29
APTX-231	ENST00000494973	SNX11	Q9Y5W9	270 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	COLEC10	Q9Y6Z7	277 aa		13.25	□□□□□ -0.29
APTX-231	ENST00000494973	PI4KA	P42356	2102 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ZFC3H1	O60293	1989 aa	Known RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973		A0A1B0GTQ1	180 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TMEM120B	A0PK00	339 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF839	A8K0R7	811 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	LMO7DN	F2Z398	122 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ARHGAP33	O14559	1287 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	SMIM24	O75264	130 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PSIP1	O75475	530 aa	Known RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PIAS2	O75928	621 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NR1D1	P20393	614 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	HSD17B2	P37059	387 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PRKAA2	P54646	552 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NAA20	P61599	178 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	CDKL1	Q00532	357 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	IRF9	Q00978	393 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TCF15	Q12870	199 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TECRL	Q5HYJ1	363 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	SLC30A9	Q6PML9	568 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TBC1D21	Q8IYX1	336 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	CCDC63	Q8NA47	563 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PRSS33	Q8NF86	280 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TCP10L	Q8TDR4	215 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	LMX1A	Q8TE12	382 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NAT14	Q8WUY8	206 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ZFPM2	Q8WW38	1151 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ATL1	Q8WXF7	558 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ASB11	Q8WXH4	323 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ATOH1	Q92858	354 aa	Predicted RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NXNL1	Q96CM4	212 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	DUSP23	Q9BVJ7	150 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	RAB11FIP5	Q9BXF6	653 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	SLC12A9	Q9BXP2	914 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	WWP1	Q9H0M0	922 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TRIT1	Q9H3H1	467 aa	Known RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PARVB	Q9HBI1	364 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TM7SF3	Q9NS93	570 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	POT1	Q9NUX5	634 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	EVA1B	Q9NVM1	165 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NUDT4	Q9NZJ9	180 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	NCKIPSD	Q9NZQ3	722 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	TAAR2	Q9P1P5	351 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	GALP	Q9UBC7	116 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	XPR1	Q9UBH6	696 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	POLG2	Q9UHN1	485 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	RNF112	Q9ULX5	631 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	ASF1A	Q9Y294	204 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PLLP	Q9Y342	182 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	HCN4	Q9Y3Q4	1203 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	OARD1	Q9Y530	152 aa		13.24	□□□□□ -0.29
APTX-231	ENST00000494973	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	13.24	□□□□□ -0.29
APTX-231	ENST00000494973	GFY	I3L273	518 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	SNX2	O60749	519 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF883	P0CG24	379 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	TPBGL	P0DKB5	382 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	MTHFD1	P11586	935 aa	Known RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ACADL	P28330	430 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	EPHA8	P29322	1005 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	HPD	P32754	393 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	NBL1	P41271	181 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	HNMT	P50135	292 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	KRT33B	Q14525	404 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	LPAL2	Q16609	132 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ZNF542P	Q5EBM4	170 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	UBE2R2	Q712K3	238 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ISCA2	Q86U28	154 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	SLC9B2	Q86UD5	537 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	GPSM1	Q86YR5	675 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	SLC22A9	Q8IVM8	553 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	TRIM48	Q8IWZ4	208 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	FAM76A	Q8TAV0	307 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	TFG	Q92734	400 aa	Predicted RBP	13.23	□□□□□ -0.29
APTX-231	ENST00000494973	RAD51AP1	Q96B01	352 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	CXorf40B	Q96DE9	158 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	C12orf66	Q96MD2	445 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ARRDC1-AS1	Q9H2J1	176 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973	ALG9	Q9H6U8	611 aa		13.23	□□□□□ -0.29
APTX-231	ENST00000494973		A6NCN8	305 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	NPEPPSL1	A6NEC2	478 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	DLL1	O00548	723 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	PLIN3	O60664	434 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	H2AFY	O75367	372 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	SPAG7	O75391	227 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	ANXA5	P08758	320 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms