RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PHC3Q8NDX5 983 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 FDCSPQ8NFU4 85 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 HM13Q8TCT9 377 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 ADAMTS17Q8TE56 1095 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 LCN9Q8WX39 176 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 SEC14L1Q92503 715 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 CPT1BQ92523 772 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 HGH1Q9BTY7 390 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 NUDT9Q9BW91 350 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 SRMSQ9H3Y6 488 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 PCMTD2Q9NV79 361 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 PCDHGA9Q9Y5G4 932 aaKnown RBP12.28□□□□□ -0.44
SKA1-205ENST00000494518 COLEC10Q9Y6Z7 277 aa12.28□□□□□ -0.44
SKA1-205ENST00000494518 DOPEY1Q5JWR5 2465 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 SEMA7AO75326 666 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ANXA9O76027 345 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 SORBS2O94875 1100 aaKnown RBP12.27□□□□□ -0.45
SKA1-205ENST00000494518 TMEM63AO94886 807 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 CAPN1P07384 714 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 NDUFS1P28331 727 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 PDHA2P29803 388 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 OTX2P32243 289 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ADRA1AP35348 466 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 RORAP35398 523 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 PRLHRP49683 370 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ZNF140P52738 457 aaPredicted RBP12.27□□□□□ -0.45
SKA1-205ENST00000494518 GSDMDP57764 484 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 PRKG2Q13237 762 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 MRPL49Q13405 166 aaKnown RBP12.27□□□□□ -0.45
SKA1-205ENST00000494518 ATP1A4Q13733 1029 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 TCEAL1Q15170 157 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 DEFB110Q30KQ9 67 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 IZUMO3Q5VZ72 239 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ITPRIPL1Q6GPH6 555 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 RANBP10Q6VN20 620 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ZNF517Q6ZMY9 492 aaPredicted RBP12.27□□□□□ -0.45
SKA1-205ENST00000494518 BBS12Q6ZW61 710 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 TRIM73Q86UV7 250 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 RCOR2Q8IZ40 523 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 NXPE1Q8N323 547 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 GALNT11Q8NCW6 608 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ACVR1CQ8NER5 493 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 OR8K5Q8NH50 307 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 ACTL9Q8TC94 416 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 COPS8Q99627 209 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 SLC7A5P2Q9GIP4 190 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 COG4Q9H9E3 785 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 LATS2Q9NRM7 1088 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 C1GALT1Q9NS00 363 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 PLEKHB1Q9UF11 243 aaPredicted RBP12.27□□□□□ -0.45
SKA1-205ENST00000494518 INTUQ9ULD6 942 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 NUP210LQ5VU65 1888 aa12.27□□□□□ -0.45
SKA1-205ENST00000494518 CRYBG3Q68DQ2 2970 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 AKR1B15C9JRZ8 316 aaPredicted RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 APOC4-APOC2K7ER74 178 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 KCNN4O15554 427 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 APOC2P02655 101 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 RALBP11234 206 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ATP1B2P14415 290 aaPredicted RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 ITGALP20701 1170 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 PRDX3P30048 256 aaKnown RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 MC4RP32245 332 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 FOXL2P58012 376 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 EIF3EP60228 445 aaKnown RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 INPP5JQ15735 1006 aaPredicted RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 KYNUQ16719 465 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 ZRANB3Q5FWF4 1079 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ANKRD20A2Q5SQ80 823 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ANKRD20A1Q5TYW2 823 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ANKRD20A3Q5VUR7 823 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 AADACL2Q6P093 401 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 DARS2Q6PI48 645 aaKnown RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 CNGA4Q8IV77 575 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ZBTB2Q8N680 514 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 Q8NA96 180 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ZFPM2Q8WW38 1151 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ULK4Q96C45 1275 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 DNAJC1Q96KC8 554 aaKnown RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 LINC00615Q96LM1 132 aaPredicted RBP12.26□□□□□ -0.45
SKA1-205ENST00000494518 TBL1YQ9BQ87 522 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 CCM2Q9BSQ5 444 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 NLNQ9BYT8 704 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 OR52A5Q9H2C5 316 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 MLXIPLQ9NP71 852 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 CASS4Q9NQ75 786 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ZNF451Q9Y4E5 1061 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 HEBP2Q9Y5Z4 205 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 ZGRF1Q86YA3 2104 aa12.26□□□□□ -0.45
SKA1-205ENST00000494518 CCDC78A2IDD5 438 aa12.25□□□□□ -0.45
SKA1-205ENST00000494518 C5orf60A6NFR6 353 aa12.25□□□□□ -0.45
SKA1-205ENST00000494518 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms