RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CCKBRP32239 447 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 PPM1FP49593 454 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-208ENST00000494334 LIMK2P53671 638 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 GPX6P59796 221 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 MGAT5Q09328 741 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 KRT33BQ14525 404 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 TMED2Q15363 201 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 C3orf62Q6ZUJ4 267 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 CYS1Q717R9 158 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 IFT81Q8WYA0 676 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 RSC1A1Q92681 617 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 KCNJ9Q92806 393 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 GATA6Q92908 595 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 TMEM74Q96NL1 305 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 SLC30A3Q99726 388 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 DPYSL5Q9BPU6 564 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
COL1A1-208ENST00000494334 TMEM121BQ9BXQ6 578 aaPredicted RBP13.2□□□□□ -0.3
COL1A1-208ENST00000494334 FAM129AQ9BZQ8 928 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 CCDC68Q9H2F9 335 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 EPB41L1Q9H4G0 881 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 MVB12BQ9H7P6 319 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 SMYD2Q9NRG4 433 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 SLC24A2Q9UI40 661 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 ASF1AQ9Y294 204 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 COMMD10Q9Y6G5 202 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 PIKFYVEQ9Y2I7 2098 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 COL27A1Q8IZC6 1860 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-208ENST00000494334 UNC13CQ8NB66 2214 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 IGHV5-10-1A0A0J9YXX1 117 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ECHS1P30084 290 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ABCG1P45844 678 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 CLCN7P51798 805 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ABRQ12979 859 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 PRKG2Q13237 762 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 GBX1Q14549 363 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 PLCL1Q15111 1095 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 WDR74Q6RFH5 385 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-208ENST00000494334 SPNS2Q8IVW8 549 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ZBTB2Q8N680 514 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 SIDT2Q8NBJ9 832 aaKnown RBP13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ACVR1CQ8NER5 493 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 OR52E1Q8NGJ3 308 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 OR5AR1Q8NGP9 310 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 NDNQ99608 321 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 ZFATQ9P243 1243 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
COL1A1-208ENST00000494334 MTRF1LQ9UGC7 380 aaKnown RBP13.19□□□□□ -0.3
COL1A1-208ENST00000494334 A0A1W2PNU3 283 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 TCRBV9S1A1TA0A576 114 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 TMX2-CTNND1H3BSU7 103 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 PIAS1O75925 651 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 C1QAP02745 245 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 GSTA2P09210 222 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 RHOXF2BP0C7M4 288 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 THRAP10827 490 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 CAPZBP47756 277 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 TIAL1Q01085 375 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 ACSBG2Q5FVE4 666 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 RBM20Q5T481 1227 aaKnown RBP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 PHF19Q5T6S3 580 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 PLXDC1Q8IUK5 500 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 OR4E2Q8NGC2 313 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 OR5K2Q8NHB8 316 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 LIN37Q96GY3 246 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 CCDC74BQ96LY2 380 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 GPR21Q99679 349 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 NRTNQ99748 197 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 RHOXF2Q9BQY4 288 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 HGH1Q9BTY7 390 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 RAB33BQ9H082 229 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 ZMYND15Q9H091 742 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 TRIT1Q9H3H1 467 aaKnown RBP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 TFB2MQ9H5Q4 396 aaKnown RBP13.18□□□□□ -0.3
COL1A1-208ENST00000494334 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 EPHA6Q9UF33 1036 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 DHRS7Q9Y394 339 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 PSAT1Q9Y617 370 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 NFS1Q9Y697 457 aa13.18□□□□□ -0.3
COL1A1-208ENST00000494334 CCDC187A0A096LP49 1063 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 OR5K3A6NET4 321 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 CXorf49A8MYA2 514 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-208ENST00000494334 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-208ENST00000494334 VPS26AO75436 327 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 C9P02748 559 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 MPOP05164 745 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 GFERP55789 205 aa13.17□□□□□ -0.3
COL1A1-208ENST00000494334 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL1A1-208ENST00000494334 CUL1Q13616 776 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms