RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 ATP5DP30049 168 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 PHBP35232 272 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 GPX6P59796 221 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 FOXK2Q01167 660 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 KLHL35Q6PF15 583 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 STRA8Q7Z7C7 330 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 VRK3Q8IV63 474 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 DCBLD1Q8N8Z6 715 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 PHC3Q8NDX5 983 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 ACVR1CQ8NER5 493 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 NCSTNQ92542 709 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 GRAMD1AQ96CP6 724 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 FOPNLQ96NB1 174 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TRIT1Q9H3H1 467 aaKnown RBP12.16□□□□□ -0.46
TRA2A-209ENST00000494255 LATS2Q9NRM7 1088 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TAS2R13Q9NYV9 303 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 KLK13Q9UKR3 277 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 NFU1Q9UMS0 254 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 CDYLQ9Y232 598 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 UNC13CQ8NB66 2214 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 CASC3O15234 703 aaKnown RBP12.16□□□□□ -0.46
TRA2A-209ENST00000494255 KDM1AO60341 852 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 SLU7O95391 586 aaKnown RBP12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TYRP1P17643 537 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 GABRB3P28472 473 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 ABCG1P45844 678 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 SHC2P98077 582 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 ABRQ12979 859 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TARDBPQ13148 414 aaKnown RBP eCLIP12.16□□□□□ -0.464e-6■■■■□ 19.5
TRA2A-209ENST00000494255 SQSTM1Q13501 440 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 KYNUQ16719 465 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 RELL1Q8IUW5 271 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 CTAGE3PQ8IX95 158 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 GPATCH11Q8N954 259 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 SIDT2Q8NBJ9 832 aaKnown RBP12.16□□□□□ -0.46
TRA2A-209ENST00000494255 CFAP61Q8NHU2 1237 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 FBF1Q8TES7 1133 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 INPP5DQ92835 1189 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 NDNQ99608 321 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 GPR21Q99679 349 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 NUDT22Q9BRQ3 303 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 HGH1Q9BTY7 390 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 STRADBQ9C0K7 418 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 RDH14Q9HBH5 336 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 POLG2Q9UHN1 485 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 SLC24A2Q9UI40 661 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 TRMT6Q9UJA5 497 aaKnown RBP12.16□□□□□ -0.46
TRA2A-209ENST00000494255 WASF3Q9UPY6 502 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 DHRS7Q9Y394 339 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 DNAH14Q0VDD8 3507 aa12.16□□□□□ -0.46
TRA2A-209ENST00000494255 FAM159BA6NKW6 160 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 ECHS1P30084 290 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 SKIV2L2P42285 1042 aaKnown RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 CLCN7P51798 805 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 INHBCP55103 352 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 NAB1Q13506 487 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 SLMAPQ14BN4 828 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 ISXQ2M1V0 245 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 RBM20Q5T481 1227 aaKnown RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 PHF19Q5T6S3 580 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 FAM45BPQ6NSW5 357 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 TTC23LQ6PF05 361 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 WDR74Q6RFH5 385 aaPredicted RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 UNC5DQ6UXZ4 953 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 PLXDC1Q8IUK5 500 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 OR4D9Q8NGE8 314 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 OR5AR1Q8NGP9 310 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 FAM45AQ8TCE6 357 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 LCN9Q8WX39 176 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 JPH3Q8WXH2 748 aaPredicted RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 ATXN7L3BQ96GX2 97 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 ELMO2Q96JJ3 720 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 CPNE1Q99829 537 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 NINJ2Q9NZG7 142 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 GALPQ9UBC7 116 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 TSR3Q9UJK0 312 aaKnown RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 TDRKHQ9Y2W6 561 aaKnown RBP12.15□□□□□ -0.46
TRA2A-209ENST00000494255 MSRB2Q9Y3D2 182 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 PSAT1Q9Y617 370 aa12.15□□□□□ -0.46
TRA2A-209ENST00000494255 CXorf49A8MYA2 514 aaPredicted RBP12.14□□□□□ -0.47
TRA2A-209ENST00000494255 PIAS1O75925 651 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 CBSLP0DN79 551 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 ENO3P13929 434 aaPredicted RBP12.14□□□□□ -0.47
TRA2A-209ENST00000494255 CSF2RBP32927 897 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 CBSP35520 551 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 PRKG2Q13237 762 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
TRA2A-209ENST00000494255 GBX1Q14549 363 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 KBTBD12Q3ZCT8 623 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 ACSBG2Q5FVE4 666 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 HECTD2Q5U5R9 776 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 ARMC6Q6NXE6 501 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 TMEM71Q6P5X7 295 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 OOSP2Q86WS3 158 aa12.14□□□□□ -0.47
TRA2A-209ENST00000494255 MARCH9Q86YJ5 346 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms