RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 MID2Q9UJV3 735 aa14.59□□□□□ -0.07
ACTB-213ENST00000493945 ARHGEF17Q96PE2 2063 aaPredicted RBP14.59□□□□□ -0.07
ACTB-213ENST00000493945 OTOGLQ3ZCN5 2332 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 SYCE1LA8MT33 242 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 YY2O15391 372 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PHGDHO43175 533 aaKnown RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 GLRA3O75311 464 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 ALDOAP04075 364 aaKnown RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 C2P06681 752 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 CCDC166P0CW27 439 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 MTHFD1P11586 935 aaKnown RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 RPL10P27635 214 aaKnown RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 GCAP28676 217 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 DAB2P98082 770 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 GBX1Q14549 363 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 SF3A2Q15428 464 aaKnown RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 NR0B2Q15466 257 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PRAMEF14Q5SWL7 426 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 KLHL35Q6PF15 583 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 CMC1Q7Z7K0 106 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 MCOLN3Q8TDD5 553 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 NAT14Q8WUY8 206 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 TFGQ92734 400 aaPredicted RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 OR52A5Q9H2C5 316 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 FSCN3Q9NQT6 498 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PRDM8Q9NQV8 689 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PCMTD2Q9NV79 361 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 TBC1D29Q9UFV1 150 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 DCDC2Q9UHG0 476 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PNMA8BQ9ULN7 279 aaPredicted RBP14.58□□□□□ -0.08
ACTB-213ENST00000493945 TMCO1Q9UM00 188 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PSMD13Q9UNM6 376 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 ACTL7BQ9Y614 415 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 NFS1Q9Y697 457 aa14.58□□□□□ -0.08
ACTB-213ENST00000493945 PRR19A6NJB7 356 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 BTN3A1O00481 513 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 COPEO14579 308 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 KLHL2O95198 593 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 RBP1P09455 135 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 SLC35E2BP0CK96 405 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 HSD17B2P37059 387 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 MAGEA12P43365 314 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 AP1S2P56377 157 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 HHEXQ03014 270 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 BNIP3Q12983 259 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 CSHL1Q14406 222 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 C14orf28Q4W4Y0 310 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 ACSBG2Q5FVE4 666 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 KCTD16Q68DU8 428 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 IYDQ6PHW0 289 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 FAM83HQ6ZRV2 1179 aaPredicted RBP14.57□□□□□ -0.08
ACTB-213ENST00000493945 NRROSQ86YC3 692 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 CEP97Q8IW35 865 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 SFRP1Q8N474 314 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 FAM181AQ8N9Y4 354 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 GIMAP7Q8NHV1 300 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 CCL4L1Q8NHW4 92 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 STAG3L4Q8TBR4 150 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 SREK1Q8WXA9 508 aaKnown RBP14.57□□□□□ -0.08
ACTB-213ENST00000493945 RAD51AP1Q96B01 352 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 RMDN2Q96LZ7 410 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 CDC6Q99741 560 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 EPB41L1Q9H4G0 881 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 NOVA2Q9UNW9 492 aaKnown RBP14.57□□□□□ -0.08
ACTB-213ENST00000493945 MED16Q9Y2X0 877 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 PLEKHM1Q9Y4G2 1056 aa14.57□□□□□ -0.08
ACTB-213ENST00000493945 PCYT1BQ9Y5K3 369 aaPredicted RBP14.57□□□□□ -0.08
ACTB-213ENST00000493945 GPR179Q6PRD1 2367 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 RHPN2P1A8MT19 583 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 XRCC1P18887 633 aaPredicted RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 FASLGP48023 281 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 PPM1FP49593 454 aaPredicted RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 LIMK1P53667 647 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 ZNF460Q14592 562 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 ACAP2Q15057 778 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 PLCL1Q15111 1095 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 RPE65Q16518 533 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 ZNF658BQ4V348 819 aaPredicted RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 AGBL2Q5U5Z8 902 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 CAPRIN2Q6IMN6 1127 aaKnown RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 UBE2R2Q712K3 238 aaPredicted RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 GATAD2AQ86YP4 633 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 SRRM1Q8IYB3 904 aaKnown RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 FBXO15Q8NCQ5 510 aaPredicted RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 ACVR1CQ8NER5 493 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 OR5K2Q8NHB8 316 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 CFAP61Q8NHU2 1237 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 SETD7Q8WTS6 366 aaKnown RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 EEF1AKMT1Q8WVE0 214 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 ATL1Q8WXF7 558 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 SCYL1Q96KG9 808 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 FERD3LQ96RJ6 166 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 SLC32A1Q9H598 525 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 TFB2MQ9H5Q4 396 aaKnown RBP14.56□□□□□ -0.08
ACTB-213ENST00000493945 IL21RQ9HBE5 538 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 UCKL1Q9NWZ5 548 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 EURLQ9NYK6 297 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 SIRPGQ9P1W8 387 aa14.56□□□□□ -0.08
ACTB-213ENST00000493945 CPNE7Q9UBL6 633 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms