RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 FILIP1LQ4L180 1135 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 ATP13A5Q4VNC0 1218 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 RPUSD3Q6P087 351 aaKnown RBP13.4□□□□□ -0.26
ATG4B-222ENST00000491867 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 CEP97Q8IW35 865 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 GPR135Q8IZ08 494 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 NIPA2Q8N8Q9 360 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 C12orf66Q96MD2 445 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 TTC25Q96NG3 672 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 TAAR6Q96RI8 345 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 BPIFA3Q9BQP9 254 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 MCCC2Q9HCC0 563 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 NEU2Q9Y3R4 380 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 GSAPA4D1B5 854 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 GOLGA6L22H0YM25 854 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 MATN3O15232 486 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 UNC5CO95185 931 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 MBD3O95983 291 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 MMP2P08253 660 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 CD63P08962 238 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 CD99P14209 185 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 PVRP15151 417 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 PBLDP30039 288 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 ART1P52961 327 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 CTSCP53634 463 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 DCDP81605 110 aaKnown RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 Q0VFX4 171 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 KRT81Q14533 505 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 RASGEF1AQ8N9B8 481 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 ZFPM2Q8WW38 1151 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 MTFMTQ96DP5 389 aaKnown RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 VPS35Q96QK1 796 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 TMUB1Q9BVT8 246 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 GPR63Q9BZJ6 419 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 HAUS2Q9NVX0 235 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 AMACRQ9UHK6 382 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 ZNF711Q9Y462 761 aa13.39□□□□□ -0.27
ATG4B-222ENST00000491867 NCOA6Q14686 2063 aaPredicted RBP13.39□□□□□ -0.27
ATG4B-222ENST00000491867 MFSD11O43934 449 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 CD48P09326 243 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 PRDX3P30048 256 aaKnown RBP13.38□□□□□ -0.27
ATG4B-222ENST00000491867 ADORA2A-AS1P86434 159 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 GALNT2Q10471 571 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 CDSNQ15517 529 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 METRNLQ641Q3 311 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 TIGD7Q6NT04 549 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-222ENST00000491867 MRPL14Q6P1L8 145 aaKnown RBP13.38□□□□□ -0.27
ATG4B-222ENST00000491867 ISLR2Q6UXK2 745 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 FAM71BQ8TC56 605 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-222ENST00000491867 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 NAP1L5Q96NT1 182 aaPredicted RBP13.38□□□□□ -0.27
ATG4B-222ENST00000491867 AP1M1Q9BXS5 423 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 PITPNM3Q9BZ71 974 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 LHPPQ9H008 270 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 MAGEE1Q9HCI5 957 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 IP6K2Q9UHH9 426 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 ANAPC7Q9UJX3 599 aa13.38□□□□□ -0.27
ATG4B-222ENST00000491867 ATRQ13535 2644 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 INTS1Q8N201 2190 aaKnown RBP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 OR2AG2A6NM03 316 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 SMTNL1A8MU46 457 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 MATN2O00339 956 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 OR2B3O76000 313 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 DRD2P14416 443 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 MMP11P24347 488 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 SRSF11Q05519 484 aaKnown RBP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 KRT33BQ14525 404 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 NKAIN1Q4KMZ8 207 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 FIGNQ5HY92 759 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 RHBDD2Q6NTF9 364 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 TMEM220Q6QAJ8 160 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 PROKR1Q8TCW9 393 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 BRSK1Q8TDC3 778 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 FATE1Q969F0 183 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 SPRTNQ9H040 489 aaPredicted RBP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 SRMSQ9H3Y6 488 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 DEF6Q9H4E7 631 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 BPIFA1Q9NP55 256 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 DHCR7Q9UBM7 475 aaKnown RBP13.37□□□□□ -0.27
ATG4B-222ENST00000491867 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 AP1M2Q9Y6Q5 423 aa13.37□□□□□ -0.27
ATG4B-222ENST00000491867 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
ATG4B-222ENST00000491867 SOCS6O14544 535 aa13.36□□□□□ -0.27
ATG4B-222ENST00000491867 AURKAO14965 403 aa13.36□□□□□ -0.27
ATG4B-222ENST00000491867 FAM155BO75949 473 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms