RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 FGF22Q9HCT0 170 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 FADS2P1A8MWK0 482 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SIGLEC6O43699 453 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 EPOP01588 193 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SLC4A1P02730 911 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 ADRB1P08588 477 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 HOXC4P09017 264 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PIM1P11309 404 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 POLD2P49005 469 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 GEMP55040 296 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SRP54P61011 504 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 HNRNPKP61978 463 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 CDK3Q00526 305 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TUBB3Q13509 450 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 LRRC36Q1X8D7 754 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 MMEL1Q495T6 779 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 ITPRIPL1Q6GPH6 555 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 RAET1GQ6H3X3 334 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 RANBP10Q6VN20 620 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 RD3Q7Z3Z2 195 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 HID1Q8IV36 788 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 NRSN1Q8IZ57 195 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TTC30BQ8N4P2 665 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 LMX1AQ8TE12 382 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 WDR92Q96MX6 357 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 LRRC61Q9BV99 259 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 NDUFA13Q9P0J0 144 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 APOBEC3BQ9UH17 382 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 DCDC2Q9UHG0 476 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 CNOT6Q9ULM6 557 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SMIM31A0A1B0GVY4 71 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 AQP9O43315 295 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 USP12O75317 370 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 ANXA9O76027 345 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 PROCP04070 461 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 SERPINE1P05121 402 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 CEACAM5P06731 702 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 FTH1P19P0C7X4 201 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 MYCLP1P12525 358 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-219ENST00000491747 VCLP18206 1134 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 GPR1P46091 355 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 HK3P52790 923 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 BTKQ06187 659 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 PRRT3Q5FWE3 981 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 HENMT1Q5T8I9 393 aaKnown RBP9.25□□□□□ -0.93
BRCA1-219ENST00000491747 KCTD11Q693B1 232 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 DENND5AQ6IQ26 1287 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 PGM2L1Q6PCE3 622 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF765Q7L2R6 523 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 ARHGAP22Q7Z5H3 698 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 TRIM74Q86UV6 250 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 NLRP8Q86W28 1048 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 OR56A4Q8NGH8 313 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 CNDP2Q96KP4 475 aaKnown RBP9.25□□□□□ -0.93
BRCA1-219ENST00000491747 BTBD9Q96Q07 612 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 BPIFA1Q9NP55 256 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 KCTD5Q9NXV2 234 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 MOCS1Q9NZB8 636 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 KLQ9UEF7 1012 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 WASF3Q9UPY6 502 aa9.25□□□□□ -0.93
BRCA1-219ENST00000491747 ZFC3H1O60293 1989 aaKnown RBP9.25□□□□□ -0.93
BRCA1-219ENST00000491747 LY6G6EA0A0G2JKS1 128 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CACNB4O00305 520 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 INPP4BO15327 924 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 STK10O94804 968 aaKnown RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 LDOC1O95751 146 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 FGF3P11487 239 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 BPIP17213 487 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 HTR1BP28222 390 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TEAD1P28347 426 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 MAP7Q14244 749 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PTPRCAPQ14761 206 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 DEFB133Q30KQ1 61 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PROX2Q3B8N5 592 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TEDDM1Q5T9Z0 273 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF534Q76KX8 674 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 POU5F2Q8N7G0 328 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ICA1LQ8NDH6 482 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 OR4C6Q8NH72 309 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CCDC124Q96CT7 223 aaKnown RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 NDNQ99608 321 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 CDC6Q99741 560 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 FERMT1Q9BQL6 677 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 GPR63Q9BZJ6 419 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 FAM83DQ9H4H8 585 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PKD2L2Q9NZM6 624 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 FTSJ1Q9UET6 329 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 POMPQ9Y244 141 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TMEM98Q9Y2Y6 226 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PCYT1BQ9Y5K3 369 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ST14Q9Y5Y6 855 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 U3KQA8 63 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 SPTBN2O15020 2390 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 H3BM21 787 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 TNFSF14O43557 240 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 ITM2AO43736 263 aa9.24□□□□□ -0.93
BRCA1-219ENST00000491747 PEX1O43933 1283 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms