RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ZCCHC14Q8WYQ9 949 aaKnown RBP15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 RSC1A1Q92681 617 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CCDC68Q9H2F9 335 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 MVB12BQ9H7P6 319 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 AKAP7Q9P0M2 348 aaPredicted RBP15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PDP2Q9P2J9 529 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 DKK4Q9UBT3 224 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CDYLQ9Y232 598 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 LOXL2Q9Y4K0 774 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PCDHGA8Q9Y5G5 932 aa15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 MN1Q10571 1320 aaPredicted RBP15.87■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PLD2O14939 933 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 HGSO14964 777 aaPredicted RBP15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 BRINP1O60477 761 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CAPNS1P04632 268 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PLTPP55058 493 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 GFERP55789 205 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 C16orf72Q14CZ0 275 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 SNAP47Q5SQN1 464 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PLEKHS1Q5SXH7 462 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 KLHL35Q6PF15 583 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 VRK3Q8IV63 474 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CNTN4Q8IWV2 1026 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 LSMEM2Q8N112 164 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 FBXO39Q8N4B4 442 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CEP112Q8N8E3 955 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 KDF1Q8NAX2 398 aaPredicted RBP15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 NOA1Q8NC60 698 aaKnown RBP15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PHC3Q8NDX5 983 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 FBXO25Q8TCJ0 367 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CMKLR1Q99788 373 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 HGH1Q9BTY7 390 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 SAYSD1Q9NPB0 183 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PPANQ9NQ55 473 aaKnown RBP15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 KLHL3Q9UH77 587 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 ASF1AQ9Y294 204 aa15.86■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PMS2P1A4D2B8 440 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 E5RI56 91 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 AGRPO00253 132 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CAPN5O15484 640 aaPredicted RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 DXOO77932 396 aaKnown RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 HAUS5O94927 633 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 SLCO2B1O94956 709 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 C9P02748 559 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 JMJD7P0C870 316 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CHRM3P20309 590 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CARSP49589 748 aaKnown RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TRADDQ15628 312 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TRMT10BQ6PF06 316 aaKnown RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CNSTQ6PJW8 725 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 IGF2-ASQ6U949 168 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 ZDHHC24Q6UX98 284 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 KIAA0408Q6ZU52 694 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OOSP2Q86WS3 158 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TBC1D21Q8IYX1 336 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OR5AR1Q8NGP9 310 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 GSDMBQ8TAX9 411 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PYROXD1Q8WU10 500 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 SEC14L1Q92503 715 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PRR11Q96HE9 360 aaPredicted RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TGM7Q96PF1 710 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PHACTR1Q9C0D0 580 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 RAB33BQ9H082 229 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TRIT1Q9H3H1 467 aaKnown RBP15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 EPHA6Q9UF33 1036 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 COMMD10Q9Y6G5 202 aa15.85■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 UNC13CQ8NB66 2214 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 ESYT3A0FGR9 886 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OR5K3A6NET4 321 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 HGFP14210 728 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 RBMS1P29558 406 aaKnown RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 CSTF2P33240 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 MLLT3P42568 568 aaPredicted RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 LEPRP48357 1165 aaKnown RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 GUCY2DQ02846 1103 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PRKG2Q13237 762 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 GLE1Q53GS7 698 aaKnown RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TEDDM1Q5T9Z0 273 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 IRGCQ6NXR0 463 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 ZNF549Q6P9A3 640 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 GALNT7Q86SF2 657 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 AGBL5Q8NDL9 886 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OR52E1Q8NGJ3 308 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OR5K2Q8NHB8 316 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 LCN9Q8WX39 176 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 KCNJ9Q92806 393 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 FAM136AQ96C01 138 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 ZDHHC12Q96GR4 267 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 C9orf72Q96LT7 481 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 AARSD1Q9BTE6 412 aaKnown RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 TFB2MQ9H5Q4 396 aaKnown RBP15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 LATS2Q9NRM7 1088 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 PISDQ9UG56 409 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 POLG2Q9UHN1 485 aa15.84■□□□□ 0.13
MSH5-SAPCD1-206ENST00000491552 OR6C74A6NCV1 312 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 A8MU76 341 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 TNFSF15O95150 251 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 RPN2P04844 631 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ITGA2BP08514 1039 aa15.83■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ANKRD34CP0C6C1 535 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms