RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 HMGXB4Q9UGU5 601 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 DCDC2Q9UHG0 476 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ERGIC3Q9Y282 383 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 TDRKHQ9Y2W6 561 aaKnown RBP3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF711Q9Y462 761 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 DMRT1Q9Y5R6 373 aa3.43□□□□□ -1.86
CRNKL1-203ENST00000490258 ANKRD36A6QL64 1941 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 GOLGA8QA0A0J9YX86 632 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 GOLGA8OA6NCC3 632 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 GOLGA8NF8WBI6 632 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SLCO1B7G3V0H7 640 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PLOD2O00469 737 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 KPNA4O00629 521 aaPredicted RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TPP1O14773 563 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 HNRNPDLO14979 420 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 XPO1O14980 1071 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 AREL1O15033 823 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 HDAC3O15379 428 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SEPT4O43236 478 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 GRID2O43424 1007 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 BRINP1O60477 761 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PQBP1O60828 265 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 AVILO75366 819 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TOM1L1O75674 476 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 STAM2O75886 525 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DNAJB5O75953 348 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CLPXO76031 633 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SEC14L2O76054 403 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 RASAL1O95294 804 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 OXSR1O95747 527 aaPredicted RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC25A27O95847 323 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TRUB2O95900 331 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TOP3BO95985 862 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ASGR1P07306 291 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 C1SP09871 688 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TFPTP0C1Z6 253 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CXCL8P10145 99 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 KITP10721 976 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CCL5P13501 91 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TYRP1P17643 537 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 JAK1P23458 1154 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PSMA2P25787 234 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ITGB8P26012 769 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SFNP31947 248 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SERPINB5P36952 375 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TM4SF4P48230 202 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 RXRGP48443 463 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ARCN1P48444 511 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ACOT2P49753 483 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TMED10P49755 219 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 HLCSP50747 726 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP4BP51164 291 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CCL23P55773 120 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 NME5P56597 212 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PSMC1P62191 440 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DGCR2P98153 550 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ZBTB17Q13105 803 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ITGA7Q13683 1181 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIM25Q14258 630 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PTK2BQ14289 1009 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PDK2Q15119 407 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DHCR24Q15392 516 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DGKDQ16760 1214 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 HADHQ16836 314 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ARL13BQ3SXY8 428 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC36A3Q495N2 470 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIM60Q495X7 471 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 MINDY4Q4G0A6 757 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PTPN20Q4JDL3 420 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC9B1Q4ZJI4 515 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 C2CD6Q53TS8 623 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 MARCH8Q5T0T0 291 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 SLX4IPQ5VYV7 408 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ITPRIPL1Q6GPH6 555 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 THOC7Q6I9Y2 204 aaKnown RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 KRT80Q6KB66 452 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 FAM45BPQ6NSW5 357 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 HMBOX1Q6NT76 420 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DCUN1D2Q6PH85 259 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TMEM270Q6UE05 265 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 OLFML1Q6UWY5 402 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ZYG11AQ6WRX3 759 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ZCCHC23Q6ZST2 131 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 LHFPL2Q6ZUX7 228 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 NEK10Q6ZWH5 1172 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 FRA10AC1Q70Z53 315 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 DEFB128Q7Z7B8 93 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 MRGPRGQ86SM5 289 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CLVS1Q8IUQ0 354 aaPredicted RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 EPHX4Q8IUS5 362 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PHYKPLQ8IUZ5 450 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 C10orf107Q8IVU9 208 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 CDKL3Q8IVW4 592 aaPredicted RBP3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TTC30BQ8N4P2 665 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PQLC3Q8N755 202 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 PLD5Q8N7P1 536 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP6V0D2Q8N8Y2 350 aa3.42□□□□□ -1.86
CRNKL1-203ENST00000490258 FAM47BQ8NA70 645 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms