RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CSF2RBP32927 897 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 CBSP35520 551 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 SKIV2L2P42285 1042 aaKnown RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 TUBB4BP68371 445 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 HSPA14Q0VDF9 509 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 CTBP1Q13363 440 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 PLCL1Q15111 1095 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 AMZ1Q400G9 498 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 LRRC8EQ6NSJ5 796 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 UGT3A1Q6NUS8 523 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 NEK10Q6ZWH5 1172 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 ANKMY2Q8IV38 441 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 PALM2Q8IXS6 379 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 OR5K2Q8NHB8 316 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 WDR36Q8NI36 951 aaKnown RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 LKAAEAR1Q8TD35 194 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 CDKL2Q92772 493 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 ZDHHC12Q96GR4 267 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 CD180Q99467 661 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 NUDT22Q9BRQ3 303 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 TMEM121BQ9BXQ6 578 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 B3GNT4Q9C0J1 378 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 TRIT1Q9H3H1 467 aaKnown RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 TFB2MQ9H5Q4 396 aaKnown RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 PPANQ9NQ55 473 aaKnown RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 FBXO6Q9NRD1 293 aaPredicted RBP10.8□□□□□ -0.68
CPSF7-212ENST00000489728 ASF1AQ9Y294 204 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 CRYL1Q9Y2S2 319 aa10.8□□□□□ -0.68
CPSF7-212ENST00000489728 IGHV5-10-1A0A0J9YXX1 117 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ESYT3A0FGR9 886 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 FAM149AA5PLN7 773 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 IQCF5A8MTL0 148 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ESPNB1AK53 854 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 NIPSNAP2O75323 286 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 VPS26AO75436 327 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 AMD1P17707 334 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CHRM3P20309 590 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 STX2P32856 288 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 SHMT2P34897 504 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CCNFP41002 786 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 LSSP48449 732 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CLCN7P51798 805 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CLDN6P56747 220 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 NAB1Q13506 487 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ZNF789Q5FWF6 425 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 TRMT10BQ6PF06 316 aaKnown RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 UNQ6494/PRO21346Q6UXR6 183 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 PRSS42Q7Z5A4 293 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 OOSP2Q86WS3 158 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ZNF761Q86XN6 746 aaPredicted RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 DCUN1D3Q8IWE4 304 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 UNC5BQ8IZJ1 945 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 KRT222Q8N1A0 295 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ZBTB2Q8N680 514 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 EIF1ADQ8N9N8 165 aaKnown RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 PHC3Q8NDX5 983 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ATXN7L3BQ96GX2 97 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 FOPNLQ96NB1 174 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 FERD3LQ96RJ6 166 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 FMO2Q99518 471 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CMKLR1Q99788 373 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 AARSD1Q9BTE6 412 aaKnown RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ZMYND15Q9H091 742 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 POLR1BQ9H9Y6 1135 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 RDH14Q9HBH5 336 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 TAS2R13Q9NYV9 303 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 ATXN7L1Q9ULK2 861 aaPredicted RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 DHRS7Q9Y394 339 aa10.79□□□□□ -0.68
CPSF7-212ENST00000489728 CFAP20Q9Y6A4 193 aaKnown RBP10.79□□□□□ -0.68
CPSF7-212ENST00000489728 KNTC1P50748 2209 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 UNC13CQ8NB66 2214 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TRABD2BA6NFA1 517 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 PLD2O14939 933 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 HAUS5O94927 633 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 MATN4O95460 622 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 AHSGP02765 367 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 ITGB6P18564 788 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 MAGEA4P43358 317 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CARSP49589 748 aaKnown RBP10.78□□□□□ -0.68
CPSF7-212ENST00000489728 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 MPP1Q00013 466 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CFHR1Q03591 330 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 BRD3Q15059 726 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TRADDQ15628 312 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 PHF19Q5T6S3 580 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 NKAIN2Q5VXU1 208 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 FAM45BPQ6NSW5 357 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 DUS1LQ6P1R4 473 aaKnown RBP10.78□□□□□ -0.68
CPSF7-212ENST00000489728 ZNF549Q6P9A3 640 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CYB5D1Q6P9G0 228 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TTC23LQ6PF05 361 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CNSTQ6PJW8 725 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 ZNF574Q6ZN55 896 aaPredicted RBP10.78□□□□□ -0.68
CPSF7-212ENST00000489728 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms