RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ASZ1Q8WWH4 475 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 TUBB6Q9BUF5 446 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 NMUR2Q9GZQ4 415 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 DLL3Q9NYJ7 618 aa12.46□□□□□ -0.41
NELFE-209ENST00000488426 TNPO3Q9Y5L0 923 aaKnown RBP12.46□□□□□ -0.41
NELFE-209ENST00000488426 A0A1W2PP55 124 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 INPP4BO15327 924 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 FFAR2O15552 330 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 RNASEH2AO75792 299 aaKnown RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 MLYCDO95822 493 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 DNTTP04053 509 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 C8GP07360 202 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 ENO2P09104 434 aaPredicted RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 GSTM1P09488 218 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 VCLP18206 1134 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 GABRG2P18507 467 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 GSTM4Q03013 218 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 ACTN3Q08043 901 aaPredicted RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 LCP2Q13094 533 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 SP140Q13342 867 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 KRT72Q14CN4 511 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 BCL7AQ4VC05 210 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 EOGTQ5NDL2 527 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 METTL2BQ6P1Q9 378 aaKnown RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 DEFB119Q8N690 84 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 ELMO1Q92556 727 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 ZNF514Q96K75 400 aaPredicted RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 SHCBP1LQ9BZQ2 653 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 MKRN2Q9H000 416 aaKnown RBP12.46□□□□□ -0.42
NELFE-209ENST00000488426 SERGEFQ9UGK8 458 aa12.46□□□□□ -0.42
NELFE-209ENST00000488426 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 DCDC2BA2VCK2 349 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 NCF1BA6NI72 391 aaPredicted RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 OR2AG2A6NM03 316 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 NCF1CA8MVU1 366 aaPredicted RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 K7ESM1 405 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 UBFD1O14562 309 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 SLC16A5O15375 505 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 VEGFDO43915 354 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 HNRNPCL1O60812 293 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 GPC4O75487 556 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 FSBPO95073 299 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 UNC5CO95185 931 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 PCDH8O95206 1070 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 FGF4P08620 206 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 NCF1P14598 390 aaPredicted RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 TEAD1P28347 426 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 CLCQ05315 142 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 HSPA14Q0VDF9 509 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 SFSWAPQ12872 951 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 BOP1Q14137 746 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 PCBP2Q15366 365 aaKnown RBP eCLIP12.45□□□□□ -0.42
NELFE-209ENST00000488426 CSRP2Q16527 193 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 TTC31Q49AM3 519 aaPredicted RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 VWA5B1Q5TIE3 1220 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 KIAA1161Q6NSJ0 714 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 PRR23CQ6ZRP0 262 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 ACAD11Q709F0 780 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 RPS27LQ71UM5 84 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 TMPRSS6Q8IU80 811 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 C10orf67Q8IYJ2 551 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 PELI3Q8N2H9 469 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 MAPK15Q8TD08 544 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 GLMNQ92990 594 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 CCM2Q9BSQ5 444 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 TRIM39Q9HCM9 518 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 TCF7L2Q9NQB0 619 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 FBXL12Q9NXK8 326 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
NELFE-209ENST00000488426 PCTPQ9UKL6 214 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 ADAMTS6Q9UKP5 1117 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 CDYLQ9Y232 598 aa12.45□□□□□ -0.42
NELFE-209ENST00000488426 IGLON5A6NGN9 336 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 LRRC14BA6NHZ5 514 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PLRG1O43660 514 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 CDK14O94921 469 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 EPN2O95208 641 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 MAPK9P45984 424 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 CTSCP53634 463 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 CDH13P55290 713 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 RPS21P63220 83 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 CDKL1Q00532 357 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 GTF2H3Q13889 308 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 SLC9B1Q4ZJI4 515 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 USP39Q53GS9 565 aaKnown RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
NELFE-209ENST00000488426 SULT1C3Q6IMI6 304 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 UBTD2Q8WUN7 234 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 COX14Q96I36 57 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 HIC2Q96JB3 615 aa12.44□□□□□ -0.42
NELFE-209ENST00000488426 TRIM54Q9BYV2 358 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms