RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CPNE9Q8IYJ1 553 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 AVL9Q8NBF6 648 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 OR6C4Q8NGE1 309 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 OR5AR1Q8NGP9 310 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 CFAP61Q8NHU2 1237 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 SKA2Q8WVK7 121 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ADAMTS14Q8WXS8 1223 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 RSC1A1Q92681 617 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ELMO2Q96JJ3 720 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 SLC38A3Q99624 504 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 NRTNQ99748 197 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 MCMBPQ9BTE3 642 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 RHOJQ9H4E5 214 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ACSS3Q9H6R3 686 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 RRAGDQ9NQL2 400 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 NSMCE4AQ9NXX6 385 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 CIDEBQ9UHD4 219 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 TRMT6Q9UJA5 497 aaKnown RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ATXN7L1Q9ULK2 861 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 IGF2RP11717 2491 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 IGHV1OR21-1A0A087WYE8 117 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 FAM149AA5PLN7 773 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 LILRA5A6NI73 299 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 KPNA5O15131 536 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 B4GAT1O43505 415 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 HYAL3O43820 417 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SLCO2B1O94956 709 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PNLIPP16233 465 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 TYRP1P17643 537 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SPINK2P20155 84 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SAT1P21673 171 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 MCM3P25205 808 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PHBP35232 272 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 GP5P40197 560 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 ABRQ12979 859 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PRKG2Q13237 762 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SPIDRQ14159 915 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 GBX1Q14549 363 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SLMAPQ14BN4 828 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 UAP1Q16222 522 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PLEKHS1Q5SXH7 462 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PIWIL4Q7Z3Z4 852 aaKnown RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 TMPRSS9Q7Z410 1059 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 RAB44Q7Z6P3 723 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 CHCHD4Q8N4Q1 142 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 UBXN4Q92575 508 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 TFGQ92734 400 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 FERD3LQ96RJ6 166 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 GFM1Q96RP9 751 aaKnown RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 RBBP8Q99708 897 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 CPNE1Q99829 537 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 NUDT22Q9BRQ3 303 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 TXLNGYQ9BZA5 131 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 ABCG4Q9H172 646 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 EPB41L4BQ9H329 900 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 LRRN3Q9H3W5 708 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 CAB39LQ9H9S4 337 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 RDH14Q9HBH5 336 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 TXNDC16Q9P2K2 825 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 CORO1CQ9ULV4 474 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-210ENST00000488228 PLAGL1Q9UM63 463 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 ASF1AQ9Y294 204 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 NFS1Q9Y697 457 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 KNTC1P50748 2209 aa10.77□□□□□ -0.69
UBE4B-210ENST00000488228 MED19A0JLT2 244 aaPredicted RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 AGRPO00253 132 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 RIPK2O43353 540 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 DUX1O43812 170 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 ATP5DP30049 168 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 GPR3P46089 330 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 CAPZBP47756 277 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 LIMK2P53671 638 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 PMS2P54278 862 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 EPHA4P54764 986 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 PPP1CAP62136 330 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 PLOD1Q02809 727 aaPredicted RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 NAB1Q13506 487 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 BMPR2Q13873 1038 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 KRT33BQ14525 404 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 NAA30Q147X3 362 aaPredicted RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 TTLL9Q3SXZ7 439 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 FAM45BPQ6NSW5 357 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 RBM44Q6ZP01 1051 aaKnown RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 B3GNT8Q7Z7M8 397 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 OR52E1Q8NGJ3 308 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 OR10G6Q8NH81 332 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 FAM45AQ8TCE6 357 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 INPP5DQ92835 1189 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 SH3KBP1Q96B97 665 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 CYTH2Q99418 400 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 TRIT1Q9H3H1 467 aaKnown RBP10.76□□□□□ -0.69
UBE4B-210ENST00000488228 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 UCK1Q9HA47 277 aa10.76□□□□□ -0.69
UBE4B-210ENST00000488228 TAS2R13Q9NYV9 303 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms