RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 SKIDA1Q1XH10 827 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 SEL1L2Q5TEA6 688 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 FAM199XQ6PEV8 388 aaPredicted RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 TMEM135Q86UB9 458 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 SLC13A5Q86YT5 568 aaPredicted RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 OR52E1Q8NGJ3 308 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 OR13J1Q8NGT2 312 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 C9orf43Q8TAL5 461 aaPredicted RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 ABHD17AQ96GS6 310 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 ALS2CR12Q96Q35 445 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 FRMD8P1Q9BZ68 369 aaPredicted RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 TSGA10Q9BZW7 698 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 TFB2MQ9H5Q4 396 aaKnown RBP18.78■□□□□ 0.6
CD55-209ENST00000488171 CLMPQ9H6B4 373 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 MVB12BQ9H7P6 319 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 C1GALT1Q9NS00 363 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 SOHLH2Q9NX45 425 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 GUCA1BQ9UMX6 200 aa18.78■□□□□ 0.6
CD55-209ENST00000488171 CCDC162PA2VCL2 907 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 SLC9B1P1A6NJY1 282 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 C21orf140B9A014 251 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 MATN2O00339 956 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 BTN3A1O00481 513 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 SCRG1O75711 98 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 RECKO95980 971 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 CDH3P22223 829 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 GRIA1P42261 906 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 NSG1P42857 185 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 KCNC4Q03721 635 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 ITIH4Q14624 930 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 TMTC4Q5T4D3 741 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 PACS1Q6VY07 963 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 PRUNE1Q86TP1 453 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 OR8K5Q8NH50 307 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 C1orf54Q8WWF1 131 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 TFGQ92734 400 aaPredicted RBP18.77■□□□□ 0.6
CD55-209ENST00000488171 TLR10Q9BXR5 811 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 ZNF71Q9NQZ8 489 aaPredicted RBP18.77■□□□□ 0.6
CD55-209ENST00000488171 LATS2Q9NRM7 1088 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 KCND1Q9NSA2 647 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 SLC2A6Q9UGQ3 507 aa18.77■□□□□ 0.6
CD55-209ENST00000488171 PIKFYVEQ9Y2I7 2098 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 GSAPA4D1B5 854 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 CPNE3O75131 537 aaKnown RBP18.76■□□□□ 0.59
CD55-209ENST00000488171 IFNB1P01574 187 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 ETS1P14921 441 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 PRDX3P30048 256 aaKnown RBP18.76■□□□□ 0.59
CD55-209ENST00000488171 FDFT1P37268 417 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 CSRP3P50461 194 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 ZNF449Q6P9G9 518 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 TMEM126BQ8IUX1 230 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 SLC38A9Q8NBW4 561 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 HGH1Q9BTY7 390 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 PITPNM3Q9BZ71 974 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 ACTL8Q9H568 366 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 ZNF148Q9UQR1 794 aa18.76■□□□□ 0.59
CD55-209ENST00000488171 PIPSLA2A3N6 862 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 HEATR9A2RTY3 570 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 CDC14CA4D256 554 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 LIN7AO14910 233 aaPredicted RBP18.75■□□□□ 0.59
CD55-209ENST00000488171 KRT86O43790 486 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ST6GAL1P15907 406 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ABRQ12979 859 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 GPS2Q13227 327 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 PRKG2Q13237 762 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 SEMA5AQ13591 1074 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 SNX1Q13596 522 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 LAMB3Q13751 1172 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 SIX1Q15475 284 aaPredicted RBP18.75■□□□□ 0.59
CD55-209ENST00000488171 TSTD2Q5T7W7 516 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 MEI1Q5TIA1 1274 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 PRAMEF17Q5VTA0 474 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 PPP1R21Q6ZMI0 780 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ZNF517Q6ZMY9 492 aaPredicted RBP18.75■□□□□ 0.59
CD55-209ENST00000488171 AMIGO1Q86WK6 493 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ADGRF3Q8IZF5 1079 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 GLIS1Q8NBF1 620 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 UBE2Q2Q8WVN8 375 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 HDAC10Q969S8 669 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ZNF778Q96MU6 729 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 RANBP9Q96S59 729 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 GPR87Q9BY21 358 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 TWSG1Q9GZX9 223 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 XKR8Q9H6D3 395 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 CASS4Q9NQ75 786 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 RIMKLBQ9ULI2 386 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 ICKQ9UPZ9 632 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 POLHQ9Y253 713 aa18.75■□□□□ 0.59
CD55-209ENST00000488171 QSOX1O00391 747 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 OR1I1O60431 355 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 GOT2P00505 430 aaKnown RBP18.74■□□□□ 0.59
CD55-209ENST00000488171 FTH1P02794 183 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 ACADLP28330 430 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 RPS18P62269 152 aaKnown RBP18.74■□□□□ 0.59
CD55-209ENST00000488171 TLE1Q04724 770 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 ACVR1Q04771 509 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 ZNF789Q5FWF6 425 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 NAPRTQ6XQN6 538 aa18.74■□□□□ 0.59
CD55-209ENST00000488171 OR5AR1Q8NGP9 310 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms