RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 KIF2BQ8N4N8 673 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 OR14C36Q8NHC7 312 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TWIST2Q8WVJ9 160 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 SKA2Q8WVK7 121 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 C19orf60Q96EN9 201 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 SIPA1Q96FS4 1042 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 C3orf30Q96M34 536 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 LGR4Q9BXB1 951 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 NOL11Q9H8H0 719 aaKnown RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 KLC4Q9NSK0 619 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ARL15Q9NXU5 204 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 WWOXQ9NZC7 414 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TAGLN3Q9UI15 199 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PRDM4Q9UKN5 801 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 STK38LQ9Y2H1 464 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PCYT1BQ9Y5K3 369 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 CAPN7Q9Y6W3 813 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 A0A1W2PQU0 124 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ARHGEF33A8MVX0 844 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 LOC730098B7Z3J9 87 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 K7EPI3 171 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PIP5K1BO14986 540 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 UROSP10746 265 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ESRRAP11474 423 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 NDUFV2P19404 249 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 CYP2A7P20853 494 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PTPN4P29074 926 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PDHA2P29803 388 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PBLDP30039 288 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 GDF5P43026 501 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 MAPK9P45984 424 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 SLC6A12P48065 614 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 HNMTP50135 292 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 RASSF2P50749 326 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ERVPABLB-1P60509 514 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 KCNJ2P63252 427 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 MLLT1Q03111 559 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 XKR7Q5GH72 579 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM198Q66K66 360 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 LETMD1Q6P1Q0 360 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 NEK5Q6P3R8 708 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 LARP4Q71RC2 724 aaKnown RBP eCLIP9.23□□□□□ -0.93
SF3B1-211ENST00000487698 HORMAD1Q86X24 394 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 ZNF687Q8N1G0 1237 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TCAIMQ8N3R3 496 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 OXR1Q8N573 874 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 OR2L2Q8NH16 312 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 GANCQ8TET4 914 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TRIM54Q9BYV2 358 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 OSBPL6Q9BZF3 934 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 OPTCQ9UBM4 332 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 FAM8A1Q9UBU6 413 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 TMEM98Q9Y2Y6 226 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 PTGDR2Q9Y5Y4 395 aa9.23□□□□□ -0.93
SF3B1-211ENST00000487698 MGAT4DA6NG13 374 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 C10orf142B7Z368 130 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 GPR89AB7ZAQ6 455 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 STK16O75716 305 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 OR4F21O95013 312 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PAK4O96013 591 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 OTCP00480 354 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 HIST1H2AGP0C0S8 130 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 GPR89BP0CG08 455 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 FOSL2P15408 326 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 NQO1P15559 274 aaKnown RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 HIST1H2ADP20671 130 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CD72P21854 359 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PRDX6P30041 224 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 ADSLP30566 484 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PPP2CBP62714 309 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PPP2CAP67775 309 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 KLF10Q13118 480 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 INPP5AQ14642 412 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 NAA25Q14CX7 972 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 NXNQ6DKJ4 435 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PTCRAQ6ISU1 281 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 LRRC70Q7Z2Q7 622 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CHCHD4Q8N4Q1 142 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 TEX9Q8N6V9 391 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 FBXO15Q8NCQ5 510 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 HM13Q8TCT9 377 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 MCOLN3Q8TDD5 553 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 ASB12Q8WXK4 309 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PPM1EQ8WY54 764 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 UTP4Q969X6 686 aaKnown RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 FBXL8Q96CD0 374 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 HIST1H2AHQ96KK5 128 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 MIPEPQ99797 713 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 HIST1H2AJQ99878 128 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 H2AFJQ9BTM1 129 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 SLC17A9Q9BYT1 436 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 WDR26Q9H7D7 661 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 IPPKQ9H8X2 491 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 DUSP12Q9UNI6 340 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 COPG1Q9Y678 874 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms