RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GJB7Q6PEY0 223 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 SLFN11Q7Z7L1 901 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 C11orf96Q7Z7L8 435 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 ADGRG6Q86SQ4 1221 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 ARHGAP12Q8IWW6 846 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 PGBD5Q8N414 524 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 TMEM35BQ8NCS4 154 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 RXFP2Q8WXD0 754 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 THOC3Q96J01 351 aaKnown RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 CELF6Q96J87 481 aaKnown RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 MAGED4Q96JG8 741 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 FAM81BQ96LP2 452 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 OR2AG1Q9H205 316 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 TRIM39Q9HCM9 518 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 GPN3Q9UHW5 284 aaPredicted RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 EDARQ9UNE0 448 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 CDYLQ9Y232 598 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 DNAJC16Q9Y2G8 782 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 HS3ST3B1Q9Y662 390 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 EPN1Q9Y6I3 576 aaPredicted RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 ANK2Q01484 3957 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 A0A0J9YYE9 177 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 C17orf113A0A1B0GUU1 675 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 GNA14O95837 355 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PEX11BO96011 259 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 TRBC1P01850 177 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PDHA1P08559 390 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 IL4RP24394 825 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 SDC4P31431 198 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 RFC1P35251 1148 aaPredicted RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 USP8P40818 1118 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PREPP48147 710 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 DCDP81605 110 aaKnown RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 KRTCAP3Q53RY4 240 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 TDRD12Q587J7 1177 aaKnown RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 CRTC3Q6UUV7 619 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 ARHGAP36Q6ZRI8 547 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 CHERPQ8IWX8 916 aaKnown RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 CCDC170Q8IYT3 715 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 TTC30BQ8N4P2 665 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 LILRB4Q8NHJ6 448 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PROKR1Q8TCW9 393 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 AGAP11Q8TF27 550 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PSMF1Q92530 271 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 GPR137Q96N19 417 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 CHP1Q99653 195 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 MGME1Q9BQP7 344 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 AP1M1Q9BXS5 423 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 METTL5Q9NRN9 209 aaKnown RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 PLA2G3Q9NZ20 509 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 COQ3Q9NZJ6 369 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 IFT80Q9P2H3 777 aaPredicted RBP11.27□□□□□ -0.61
TRIM56-204ENST00000487252 NDOR1Q9UHB4 597 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 MRFAP1Q9Y605 127 aa11.27□□□□□ -0.61
TRIM56-204ENST00000487252 SONP18583 2426 aaKnown RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 EFCAB8A8MWE9 144 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 EIF3CLB5ME19 914 aaKnown RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 INAFM1C9JVW0 142 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 KIF5CO60282 957 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 URI1O94763 535 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 HTR7P34969 479 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 HSPA9P38646 679 aaKnown RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 SPINT3P49223 89 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 DGKQP52824 942 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 MYBPHQ13203 477 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 LBRQ14739 615 aaKnown RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 RPE65Q16518 533 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 RALGPS1Q5JS13 557 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 ZNF648Q5T619 568 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 ARMC12Q5T9G4 340 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 OOSP2Q86WS3 158 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 DOLPP1Q86YN1 238 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 CREBRFQ8IUR6 639 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 FAM172AQ8WUF8 416 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 RMND5BQ96G75 393 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 ZNF599Q96NL3 588 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 LYSMD1Q96S90 227 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 EIF3CQ99613 913 aaKnown RBP11.26□□□□□ -0.61
TRIM56-204ENST00000487252 PITPNM3Q9BZ71 974 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 SLC7A5P2Q9GIP4 190 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 SLC22A11Q9NSA0 550 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 STMN3Q9NZ72 180 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 DTLQ9NZJ0 730 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 POMT2Q9UKY4 750 aa11.26□□□□□ -0.61
TRIM56-204ENST00000487252 A0A0U1RQJ8 604 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 CYP11B1P15538 503 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 KLK7P49862 253 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 CTSCP53634 463 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 TUBB8Q3ZCM7 444 aa11.25□□□□□ -0.61
TRIM56-204ENST00000487252 NKAIN1Q4KMZ8 207 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms