RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ITGAXP20702 1163 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 MMP11P24347 488 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 IL1R2P27930 398 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 PRDX3P30048 256 aaKnown RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 AKT1P31749 480 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 CBSP35520 551 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 SPAM1P38567 509 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 TNNT3P45378 269 aaPredicted RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 TLE4Q04727 773 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 NIPAL4Q0D2K0 466 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 MFAP5Q13361 173 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 PIGHQ14442 188 aaPredicted RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 SLC9A5Q14940 896 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 PAFAH1B3Q15102 231 aaKnown RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 PPP2R5EQ16537 467 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 ATP13A5Q4VNC0 1218 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 C1orf189Q5VU69 101 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 METRNLQ641Q3 311 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 NCBP2-AS2Q69YL0 99 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 MRPL14Q6P1L8 145 aaKnown RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 TMEM220Q6QAJ8 160 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 ISLR2Q6UXK2 745 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 DDHD1Q8NEL9 900 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 OR4E2Q8NGC2 313 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 DENND1AQ8TEH3 1009 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 LCN9Q8WX39 176 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.4□□□□□ -1.22
PDPN-205ENST00000487038 EID2BQ96D98 161 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 MTFMTQ96DP5 389 aaKnown RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 PPM1MQ96MI6 270 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 TSGA13Q96PP4 275 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 NDC1Q9BTX1 674 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 MCCC2Q9HCC0 563 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 SAMSN1Q9NSI8 373 aaKnown RBP7.4□□□□□ -1.22
PDPN-205ENST00000487038 SH3BGRL2Q9UJC5 107 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 CDYLQ9Y232 598 aa7.4□□□□□ -1.22
PDPN-205ENST00000487038 TRAV17A0A0B4J275 112 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MGAT4DA6NG13 374 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 ZSCAN9O15535 394 aaPredicted RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 MT-CYBP00156 380 aaPredicted RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 UMODP07911 640 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MMP2P08253 660 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 PIRTP0C851 137 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 ATXN8OSP0DMR3 200 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MYBL2P10244 700 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 CD99P14209 185 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MSH3P20585 1137 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 HMGCLP35914 325 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 IHHQ14623 411 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 PCSK7Q16549 785 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 HADHQ16836 314 aaKnown RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 DPCR1Q3MIW9 517 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 CT47A1Q5JQC4 288 aaPredicted RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 FNBP1LQ5T0N5 605 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 CCDC183Q5T5S1 534 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 ZNF324BQ6AW86 544 aaPredicted RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 FAAH2Q6GMR7 532 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 TLDC1Q6P9B6 456 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 SARM1Q6SZW1 724 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 FAM83HQ6ZRV2 1179 aaPredicted RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 LINC00696Q6ZRV3 163 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 CDHR3Q6ZTQ4 885 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 ZNF295-AS1Q8N0V1 137 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MMP21Q8N119 569 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 RASGEF1AQ8N9B8 481 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 C19orf47Q8N9M1 422 aaKnown RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 CCNYQ8ND76 341 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 OR1N1Q8NGS0 311 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 OR2L2Q8NH16 312 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 SUN3Q8TAQ9 357 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 DTX3LQ8TDB6 740 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 DLG3Q92796 817 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 FKBP10Q96AY3 582 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 THOC3Q96J01 351 aaKnown RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 LMF1Q96S06 567 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 ZNF670Q9BS34 389 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 CCM2Q9BSQ5 444 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 TRIM7Q9C029 511 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 DEF6Q9H4E7 631 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 TRABDQ9H4I3 376 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 WDR54Q9H977 334 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 BPIFA1Q9NP55 256 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 TAS2R14Q9NYV8 317 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 SEC14L3Q9UDX4 400 aa7.39□□□□□ -1.23
PDPN-205ENST00000487038 NXT1Q9UKK6 140 aaKnown RBP7.39□□□□□ -1.23
PDPN-205ENST00000487038 VPS13CQ709C8 3753 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 GLYATL1P3A0A0U1RQE8 302 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 CCDC78A2IDD5 438 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 FAM221AA4D161 298 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 MASP2O00187 686 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 IFRD1O00458 451 aaPredicted RBP7.38□□□□□ -1.23
PDPN-205ENST00000487038 BTN3A1O00481 513 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 GADD45BO75293 160 aaPredicted RBP7.38□□□□□ -1.23
PDPN-205ENST00000487038 ALOX12BO75342 701 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 SNRNP200O75643 2136 aaKnown RBP7.38□□□□□ -1.23
PDPN-205ENST00000487038 RASAL1O95294 804 aa7.38□□□□□ -1.23
PDPN-205ENST00000487038 MLYCDO95822 493 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms