RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
SSR4-211ENST00000486204 FBXO25Q8TCJ0 367 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 ATXN7L3BQ96GX2 97 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 PRR11Q96HE9 360 aaPredicted RBP12.62□□□□□ -0.39
SSR4-211ENST00000486204 RMDN2Q96LZ7 410 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 BIRC8Q96P09 236 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 PSMG3-AS1Q96PY0 264 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 TCF12Q99081 682 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 TTC1Q99614 292 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 WWP1Q9H0M0 922 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 CPNE7Q9UBL6 633 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 DMGDHQ9UI17 866 aaKnown RBP12.62□□□□□ -0.39
SSR4-211ENST00000486204 PSMD13Q9UNM6 376 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 PCDHGA8Q9Y5G5 932 aa12.62□□□□□ -0.39
SSR4-211ENST00000486204 PRAMEF33A0A0G2JMD5 474 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 CLEC18AA5D8T8 446 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 RHPN2P1A8MT19 583 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 IQCF5A8MTL0 148 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 TTC4O95801 387 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 FTH1P02794 183 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 OR56A5P0C7T3 313 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 GPR3P46089 330 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 ADARP55265 1226 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 RPE65Q16518 533 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 CAPRIN2Q6IMN6 1127 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 DUS1LQ6P1R4 473 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 CLEC18BQ6UXF7 455 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 TMPRSS9Q7Z410 1059 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 SLC9B2Q86UD5 537 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 KCNMB4Q86W47 210 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 ZNF761Q86XN6 746 aaPredicted RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 ANKMY2Q8IV38 441 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 DENND6AQ8IWF6 608 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 LMNTD2Q8IXW0 634 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 CFAP206Q8IYR0 622 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 OTUD6BQ8N6M0 293 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 CLEC18CQ8NCF0 446 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 GRAMD1AQ96CP6 724 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 CERS2Q96G23 380 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 INSM2Q96T92 566 aaPredicted RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 CARD6Q9BX69 1037 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 PHACTR1Q9C0D0 580 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 OR52A5Q9H2C5 316 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 LRRN3Q9H3W5 708 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 VPS37BQ9H9H4 285 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 EPB41L5Q9HCM4 733 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 ZDHHC18Q9NUE0 388 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 POT1Q9NUX5 634 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 ZC3H7BQ9UGR2 993 aaKnown RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 ACSL5Q9ULC5 683 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 ATXN7L1Q9ULK2 861 aaPredicted RBP12.61□□□□□ -0.39
SSR4-211ENST00000486204 CDYLQ9Y232 598 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 RELNP78509 3460 aa12.61□□□□□ -0.39
SSR4-211ENST00000486204 IGHV1OR21-1A0A087WYE8 117 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 LILRA5A6NI73 299 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 D6RAR5 112 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
SSR4-211ENST00000486204 ZNF500O60304 480 aaPredicted RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 NDUFS3O75489 264 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 TCEA3O75764 348 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 TNFSF15O95150 251 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 S1PR4O95977 384 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 SLC35G4P0C7Q5 338 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 ERVK-10P10266 1014 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 MTHFD1P11586 935 aaKnown RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 PDHA2P29803 388 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CCR7P32248 378 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CSF2RBP32927 897 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 PPARGP37231 505 aaPredicted RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 HALP42357 657 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CCR10P46092 362 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 PREPP48147 710 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 PLTPP55058 493 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 EIF3BP55884 814 aaKnown RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 OR1D5P58170 312 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 MPP1Q00013 466 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CTBP1Q13363 440 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 FRG1Q14331 258 aaKnown RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 HSP90AA5PQ58FG0 334 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 RNF187Q5TA31 235 aaPredicted RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 TRMT10BQ6PF06 316 aaKnown RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CLEC14AQ86T13 490 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 LRRC6Q86X45 466 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CNTN4Q8IWV2 1026 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 KRT222Q8N1A0 295 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CEP112Q8N8E3 955 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 Q8N9G6 341 aaPredicted RBP12.6□□□□□ -0.39
SSR4-211ENST00000486204 AVL9Q8NBF6 648 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 WDR48Q8TAF3 677 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 ELMO1Q92556 727 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 CFAP36Q96G28 342 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
SSR4-211ENST00000486204 L2HGDHQ9H9P8 463 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms