RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 COQ10AQ96MF6 247 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 CDIP1Q9H305 208 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 STN1Q9H668 368 aaKnown RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 CHST11Q9NPF2 352 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 AGPAT4Q9NRZ5 378 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 OGFRQ9NZT2 677 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 PCDHA7Q9UN72 937 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 FARSAQ9Y285 508 aaKnown RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 NPFFR2Q9Y5X5 522 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 A8MX80 341 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 TOX3O15405 576 aaPredicted RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 FLNAP21333 2647 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 TEAD1P28347 426 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 HTR1EP28566 365 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 FLT3P36888 993 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 GLRBP48167 497 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 ZNF235Q14590 738 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 CYTH1Q15438 398 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 CNGA3Q16281 694 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 ANO6Q4KMQ2 910 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 PYCR3Q53H96 274 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 RAET1GQ6H3X3 334 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 TRNP1Q6NT89 227 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 PWWP2BQ6NUJ5 590 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 RWDD4Q6NW29 188 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 IYDQ6PHW0 289 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 IGFL3Q6UXB1 125 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 Q6ZS92 163 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 MED25Q71SY5 747 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 BNIPLQ7Z465 357 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 PRSS42Q7Z5A4 293 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 CUZD1Q86UP6 607 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 FAM131BQ86XD5 332 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 ZNF354CQ86Y25 554 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 C1orf131Q8NDD1 294 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 CCDC47Q96A33 483 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 ECHDC3Q96DC8 303 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 DTD2Q96FN9 168 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 ZNF396Q96N95 335 aaPredicted RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 TGM7Q96PF1 710 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 TUBGCP5Q96RT8 1024 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 GTPBP4Q9BZE4 634 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 RETREG1Q9H6L5 497 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 UPF2Q9HAU5 1272 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 TMEM51Q9NW97 253 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 PPP4R1LQ9P1A2 415 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 B4GALT6Q9UBX8 382 aa6.46□□□□□ -1.38
SMC4-217ENST00000485867 CNOT8Q9UFF9 292 aaKnown RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 ARMCX3Q9UH62 379 aaPredicted RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
SMC4-217ENST00000485867 GOLGA6CA6NDK9 693 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 GOLGA6BA6NDN3 693 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FAM72CH0Y354 149 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 KCNN4O15554 427 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 KIF1CO43896 1103 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 RASSF9O75901 435 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 SOD1P00441 154 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 GOLGA6DP0CG33 693 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 CD99P14209 185 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 TYRP1P17643 537 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 SERPINA4P29622 427 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 RGRP47804 291 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 ME1P48163 572 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 VAV2P52735 878 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 RRADP55042 308 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 UBE2IP63279 158 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 FKBP3Q00688 224 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 ATP1A4Q13733 1029 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 LLGL1Q15334 1064 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FXNQ16595 210 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 KYNUQ16719 465 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 VWA2Q5GFL6 755 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FAM72AQ5TYM5 149 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FAM69BQ5VUD6 431 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 IZUMO3Q5VZ72 239 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FAM72DQ6L9T8 149 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 CYB5D1Q6P9G0 228 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 MARK2Q7KZI7 788 aaKnown RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 SLC9B2Q86UD5 537 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 TRIM74Q86UV6 250 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FAM72BQ86X60 149 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 GALNT13Q8IUC8 556 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 ZNF808Q8N4W9 903 aaPredicted RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 ZBTB2Q8N680 514 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 ARFGAP1Q8N6T3 406 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 GRHL3Q8TE85 626 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 HDAC11Q96DB2 347 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 TBC1D31Q96DN5 1066 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 FCRL4Q96PJ5 515 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 HERPUD2Q9BSE4 406 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 CHST8Q9H2A9 424 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 SYNCQ9H7C4 482 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 ATP13A3Q9H7F0 1226 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 PDE7BQ9NP56 450 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 KCTD5Q9NXV2 234 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 GOLGA6AQ9NYA3 693 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 CPNE7Q9UBL6 633 aa6.45□□□□□ -1.38
SMC4-217ENST00000485867 UBA2Q9UBT2 640 aaPredicted RBP6.45□□□□□ -1.38
SMC4-217ENST00000485867 TBC1D29Q9UFV1 150 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms