RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C17orf62Q9BQA9 187 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 TLR10Q9BXR5 811 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 TFB2MQ9H5Q4 396 aaKnown RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CASS4Q9NQ75 786 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 KLHL8Q9P2G9 620 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 SAE1Q9UBE0 346 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 TRHDEQ9UKU6 1024 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CRYBG3Q68DQ2 2970 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 ABCA12Q86UK0 2595 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 C2orf81A6NN90 581 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 MAP3K7O43318 606 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 CST8O60676 142 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 KLF7O75840 302 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SRP72O76094 671 aaKnown RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 LCA5LO95447 670 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 IGHEP01854 428 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 PECAM1P16284 738 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 CYP2A7P20853 494 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 PRLHRP49683 370 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SOX8P57073 446 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 DYNLT1P63172 113 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 XIAPP98170 497 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SSPNQ14714 243 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SPA17Q15506 151 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 PRR30Q53SZ7 412 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 FBXO38Q6PIJ6 1188 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 CFAP206Q8IYR0 622 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 IQCKQ8N0W5 287 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 IPMKQ8NFU5 416 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 LCN9Q8WX39 176 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 P3H4Q92791 437 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SGSM3Q96HU1 749 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 SRMSQ9H3Y6 488 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 ASB8Q9H765 288 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 ERRFI1Q9UJM3 462 aaPredicted RBP12.63□□□□□ -0.39
HDAC6-227ENST00000485102 INTUQ9ULD6 942 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 PADI2Q9Y2J8 665 aa12.63□□□□□ -0.39
HDAC6-227ENST00000485102 TMEM150CB9EJG8 249 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 C9J4A7 227 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 E7EQ34 232 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 H3BMH7 237 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
HDAC6-227ENST00000485102 ANXA9O76027 345 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 RALBP11234 206 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 ST6GAL1P15907 406 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 AGXTP21549 392 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 PBLDP30039 288 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-227ENST00000485102 ATP1A4Q13733 1029 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 KRT33BQ14525 404 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 PTPRCAPQ14761 206 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 MYBPC3Q14896 1274 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 PLEKHN1Q494U1 663 aaPredicted RBP12.62□□□□□ -0.39
HDAC6-227ENST00000485102 TFDP3Q5H9I0 405 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 DET1Q7L5Y6 550 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 TICAM1Q8IUC6 712 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 TC2NQ8N9U0 490 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 PRR7Q8TB68 274 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 NACC2Q96BF6 587 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 ULK4Q96C45 1275 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 FER1L6-AS2Q96M78 137 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 FSD1LQ9BXM9 530 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 MFRPQ9BY79 579 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 OR52A5Q9H2C5 316 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 MVB12BQ9H7P6 319 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 SLC5A6Q9Y289 635 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 B3GNT3Q9Y2A9 372 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 ARL5AQ9Y689 179 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 AP1M2Q9Y6Q5 423 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 DOCK10Q96BY6 2186 aa12.62□□□□□ -0.39
HDAC6-227ENST00000485102 PCSK5Q92824 1860 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 SVILO95425 2214 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ZGRF1Q86YA3 2104 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 IGLV3-16A0A075B6K0 115 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 A6NL46 340 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 BTN3A3O00478 584 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 BTN3A1O00481 513 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF749O43361 778 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 PSTPIP1O43586 416 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 IPO13O94829 963 aaKnown RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 CLDN1O95832 211 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 AGTP01019 485 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ALPPP05187 535 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 POLBP06746 335 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 GSTM1P09488 218 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 COMTP21964 271 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ADRA1AP35348 466 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 ARCN1P48444 511 aaKnown RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 GEMP55040 296 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
HDAC6-227ENST00000485102 GSTM4Q03013 218 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 RPA4Q13156 261 aa12.61□□□□□ -0.39
HDAC6-227ENST00000485102 PTCHD3Q3KNS1 767 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms