RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SYTL3Q4VX76 610 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 C8orf74Q6P047 294 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 RAB11FIP2Q7L804 512 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 DENND6AQ8IWF6 608 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 C2CD4AQ8NCU7 369 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-213ENST00000485080 NCSTNQ92542 709 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 CERS2Q96G23 380 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 CCDC74BQ96LY2 380 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 SLC46A1Q96NT5 459 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 CMKLR1Q99788 373 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 DPH5Q9H2P9 285 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 TFB2MQ9H5Q4 396 aaKnown RBP17.33■□□□□ 0.36
SREBF1-213ENST00000485080 SEMA5BQ9P283 1151 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 SATB2Q9UPW6 733 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 DSPP15924 2871 aaKnown RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 PLD2O14939 933 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 AMD1P17707 334 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 FMO4P31512 558 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 GABREP78334 506 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 CYP4F3Q08477 520 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 PDIA2Q13087 525 aaKnown RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 CTBP1Q13363 440 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 C16orf72Q14CZ0 275 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 TMED2Q15363 201 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 GLE1Q53GS7 698 aaKnown RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 ZNF789Q5FWF6 425 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 PHF19Q5T6S3 580 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 DUS1LQ6P1R4 473 aaKnown RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 OTOAQ7RTW8 1153 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 TBC1D21Q8IYX1 336 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 UNC5BQ8IZJ1 945 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 KRT222Q8N1A0 295 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 FBXO39Q8N4B4 442 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 ZNF578Q96N58 590 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 LRRC1Q9BTT6 524 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 FAM129AQ9BZQ8 928 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 ASCL3Q9NQ33 180 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 MOCS1Q9NZB8 636 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 AKAP7Q9P0M2 348 aaPredicted RBP17.32■□□□□ 0.36
SREBF1-213ENST00000485080 TMEM9Q9P0T7 183 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 POLG2Q9UHN1 485 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 CHMP2BQ9UQN3 213 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 CRYL1Q9Y2S2 319 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 AK5Q9Y6K8 562 aa17.32■□□□□ 0.36
SREBF1-213ENST00000485080 CTAGE15A4D2H0 777 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 BRINP1O60477 761 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 MPOP05164 745 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 ITGA2BP08514 1039 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CTAGE8P0CG41 777 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 ERVK-10P10266 1014 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 TYRP1P17643 537 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 ITGB6P18564 788 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 HSPA14Q0VDF9 509 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 KRT33BQ14525 404 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 C3orf38Q5JPI3 329 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 TEDDM1Q5T9Z0 273 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 ZDHHC24Q6UX98 284 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 UNC5DQ6UXZ4 953 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CYS1Q717R9 158 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CLEC14AQ86T13 490 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CTAGE6Q86UF2 777 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 PROSER1Q86XN7 944 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CTAGE4Q8IX94 777 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CARFQ8N187 725 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 AGBL5Q8NDL9 886 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 FBXO36Q8NEA4 188 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 OR5K2Q8NHB8 316 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 RSC1A1Q92681 617 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 KCNJ9Q92806 393 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 ZDHHC12Q96GR4 267 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 C9orf72Q96LT7 481 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 FERD3LQ96RJ6 166 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 CD180Q99467 661 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 TWSG1Q9GZX9 223 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 IARS2Q9NSE4 1012 aaKnown RBP17.31■□□□□ 0.36
SREBF1-213ENST00000485080 LOXL2Q9Y4K0 774 aa17.31■□□□□ 0.36
SREBF1-213ENST00000485080 OR5K3A6NET4 321 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CDRT15L2A8MXV6 281 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 MATN2O00339 956 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CAPN5O15484 640 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 NIPSNAP2O75323 286 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CD9P21926 228 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 MAPK9P45984 424 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CLCN7P51798 805 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 PLTPP55058 493 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 FASTKD3Q14CZ7 662 aaKnown RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 PLCL1Q15111 1095 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 TBC1D25Q3MII6 688 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 ZNF549Q6P9A3 640 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 PRSS42Q7Z5A4 293 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 VRK3Q8IV63 474 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 CEP112Q8N8E3 955 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 SNIP1Q8TAD8 396 aaKnown RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 GSDMBQ8TAX9 411 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 FBXO25Q8TCJ0 367 aa17.3■□□□□ 0.36
SREBF1-213ENST00000485080 ZCCHC14Q8WYQ9 949 aaKnown RBP17.3■□□□□ 0.36
SREBF1-213ENST00000485080 TRIT1Q9H3H1 467 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms