RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 RSRC1Q96IZ7 334 aaKnown RBP4.72□□□□□ -1.65
CALD1-219ENST00000480638 MYADMQ96S97 322 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 MMP27Q9H306 513 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 DPAGT1Q9H3H5 408 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 PDE7BQ9NP56 450 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 SIX2Q9NPC8 291 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 ECHDC1Q9NTX5 307 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 GPR75-ASB3A0A0A6YYF3 556 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 A0A1W2PRB8 838 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 A6NL46 340 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 PRR32B1ATL7 298 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 PLOD2O00469 737 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 PGM3O95394 542 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 BCL10O95999 233 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 CD48P09326 243 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 CDH11P55287 796 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 NR1D2Q14995 579 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 KIAA1644Q3SXP7 199 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 TEX38Q6PEX7 206 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 CORO6Q6QEF8 472 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 FAM114A1Q8IWE2 563 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 SCML4Q8N228 414 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 GUF1Q8N442 669 aaKnown RBP4.71□□□□□ -1.66
CALD1-219ENST00000480638 MINDY1Q8N5J2 469 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 MCUQ8NE86 351 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 MOSPD2Q8NHP6 518 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 TMEM190Q8WZ59 177 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 LPGAT1Q92604 370 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 ZNF622Q969S3 477 aaKnown RBP eCLIP4.71□□□□□ -1.66
CALD1-219ENST00000480638 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 FNDC11Q9BVV2 318 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 MXD3Q9BW11 206 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 VN1R1Q9GZP7 353 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 MRPL15Q9P015 296 aaKnown RBP4.71□□□□□ -1.66
CALD1-219ENST00000480638 OSGIN1Q9UJX0 560 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 KCNJ14Q9UNX9 436 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 RABGAP1Q9Y3P9 1069 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 GRIP1Q9Y3R0 1128 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 SNX8Q9Y5X2 465 aa4.71□□□□□ -1.66
CALD1-219ENST00000480638 GLOD5A6NK44 160 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 A8MV72 311 aaPredicted RBP4.7□□□□□ -1.66
CALD1-219ENST00000480638 E9PI62 339 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 XRCC3O43542 346 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 MED24O75448 989 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 GNB3P16520 340 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 GJA1P17302 382 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 ITGA3P26006 1051 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 GABRA5P31644 462 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 SH2D5Q6ZV89 423 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 ZNF554Q86TJ5 538 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 PPFIBP2Q8ND30 876 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 OR1J1Q8NGS3 322 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 LRR1Q96L50 414 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 TRAF4Q9BUZ4 470 aaPredicted RBP4.7□□□□□ -1.66
CALD1-219ENST00000480638 MRPL1Q9BYD6 325 aaKnown RBP4.7□□□□□ -1.66
CALD1-219ENST00000480638 BARHL1Q9BZE3 327 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 ARRDC1-AS1Q9H2J1 176 aa4.7□□□□□ -1.66
CALD1-219ENST00000480638 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
CALD1-219ENST00000480638 CHORDC1Q9UHD1 332 aaPredicted RBP4.7□□□□□ -1.66
CALD1-219ENST00000480638 HHLA1C9JL84 531 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 DNM1LO00429 736 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 BEST1O76090 585 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 CLPTM1O96005 669 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 TPOP07202 933 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 ALDH4A1P30038 563 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 MAP2K2P36507 400 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 HSD17B4P51659 736 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 CX3CL1P78423 397 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 LGALS3BPQ08380 585 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 BAATQ14032 418 aaPredicted RBP4.69□□□□□ -1.66
CALD1-219ENST00000480638 MDH1BQ5I0G3 518 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 TMEM211Q6ICI0 200 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 NOTCH2NLQ7Z3S9 236 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 CEP57L1Q8IYX8 460 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 DNAJC22Q8N4W6 341 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 ZNF383Q8NA42 475 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 APPL2Q8NEU8 664 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 OLIG1Q8TAK6 271 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 RNF128Q8TEB7 428 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 BTBD10Q9BSF8 475 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 LMF2Q9BU23 707 aaKnown RBP4.69□□□□□ -1.66
CALD1-219ENST00000480638 C2orf42Q9NWW7 574 aa4.69□□□□□ -1.66
CALD1-219ENST00000480638 HYKKA2RU49 373 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 ANKUB1A6NFN9 424 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 GAPDHSO14556 408 aaPredicted RBP4.68□□□□□ -1.66
CALD1-219ENST00000480638 OR10H2O60403 315 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 NADKO95544 446 aaPredicted RBP4.68□□□□□ -1.66
CALD1-219ENST00000480638 FRMD6-AS1P0C7T7 363 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 PLA2G4BP0C869 781 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 DCAF10Q5QP82 559 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 BRINP3Q76B58 766 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 TMEM173Q86WV6 379 aaPredicted RBP4.68□□□□□ -1.66
CALD1-219ENST00000480638 TRIML1Q8N9V2 468 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 CTCFLQ8NI51 663 aaPredicted RBP4.68□□□□□ -1.66
CALD1-219ENST00000480638 GRHL3Q8TE85 626 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 TMEM143Q96AN5 459 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 TMCO6Q96DC7 493 aa4.68□□□□□ -1.66
CALD1-219ENST00000480638 OLFM1Q99784 485 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms