RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CD200R1Q8TD46 325 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 UBXN4Q92575 508 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 INPP5DQ92835 1189 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 GFM1Q96RP9 751 aaKnown RBP19.25■□□□□ 0.67
LIME1-205ENST00000480139 CYTH2Q99418 400 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 NDNQ99608 321 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 GPR21Q99679 349 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 DPYSL5Q9BPU6 564 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 TXLNGYQ9BZA5 131 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 ACSS3Q9H6R3 686 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 TXNDC16Q9P2K2 825 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 GALPQ9UBC7 116 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 D6RAR5 112 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 RPN2P04844 631 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 ADRB1P08588 477 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 ABHD2P08910 425 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 FAM153BP0C7A2 387 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 MYBL2P10244 700 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 ENO3P13929 434 aaPredicted RBP19.24■□□□□ 0.67
LIME1-205ENST00000480139 FDXRP22570 491 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 CD1CP29017 333 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 ABCG1P45844 678 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 SPIDRQ14159 915 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 FAM153CQ494X1 144 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 HES3Q5TGS1 186 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 HECTD2Q5U5R9 776 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 DUS1LQ6P1R4 473 aaKnown RBP19.24■□□□□ 0.67
LIME1-205ENST00000480139 WDR93Q6P2C0 686 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 TMPRSS7Q7RTY8 843 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 ZNF761Q86XN6 746 aaPredicted RBP19.24■□□□□ 0.67
LIME1-205ENST00000480139 CTAGE3PQ8IX95 158 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 TBC1D21Q8IYX1 336 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 SIDT2Q8NBJ9 832 aaKnown RBP19.24■□□□□ 0.67
LIME1-205ENST00000480139 ACVR1CQ8NER5 493 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 OR10G6Q8NH81 332 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 OR5K2Q8NHB8 316 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 FAM136AQ96C01 138 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 VPS39Q96JC1 886 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 RBBP8Q99708 897 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 POLG2Q9UHN1 485 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 SLC24A2Q9UI40 661 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 TRMT6Q9UJA5 497 aaKnown RBP19.24■□□□□ 0.67
LIME1-205ENST00000480139 ASF1AQ9Y294 204 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 VWA7Q9Y334 891 aa19.24■□□□□ 0.67
LIME1-205ENST00000480139 PRAMEF33A0A0G2JMD5 474 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 DUX1O43812 170 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 PIAS1O75925 651 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 ACSL3O95573 720 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 CPNE6O95741 557 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 MAPK9P45984 424 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 CDKN2DP55273 166 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 KRT33BQ14525 404 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 GRTP1Q5TC63 336 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 LRRC8EQ6NSJ5 796 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 CCNI2Q6ZMN8 369 aaPredicted RBP19.23■□□□□ 0.67
LIME1-205ENST00000480139 RBM44Q6ZP01 1051 aaKnown RBP19.23■□□□□ 0.67
LIME1-205ENST00000480139 PPM1NQ8N819 430 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 DCBLD1Q8N8Z6 715 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 GPATCH11Q8N954 259 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 FERD3LQ96RJ6 166 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 SLC30A3Q99726 388 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 TBC1D10AQ9BXI6 508 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 TRIT1Q9H3H1 467 aaKnown RBP19.23■□□□□ 0.67
LIME1-205ENST00000480139 WASF3Q9UPY6 502 aa19.23■□□□□ 0.67
LIME1-205ENST00000480139 FAM95CA0A1B0GW59 222 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 FAM221BA6H8Z2 402 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 UBXN7O94888 489 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 MATN4O95460 622 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 MT-CO3P00414 261 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 MCM3P25205 808 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 LIMK2P53671 638 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 PMS2P54278 862 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 ACSBG2Q5FVE4 666 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 UBAP2Q5T6F2 1119 aaKnown RBP19.22■□□□□ 0.67
LIME1-205ENST00000480139 WDR74Q6RFH5 385 aaPredicted RBP19.22■□□□□ 0.67
LIME1-205ENST00000480139 CHCHD4Q8N4Q1 142 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 GRAMD1AQ96CP6 724 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 DEPDC7Q96QD5 511 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 TFB2MQ9H5Q4 396 aaKnown RBP19.22■□□□□ 0.67
LIME1-205ENST00000480139 POPDC3Q9HBV1 291 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 CLCA2Q9UQC9 943 aa19.22■□□□□ 0.67
LIME1-205ENST00000480139 UNC13CQ8NB66 2214 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 SPTBN2O15020 2390 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 A0A087WUV0 522 aaPredicted RBP19.21■□□□□ 0.67
LIME1-205ENST00000480139 CASC3O15234 703 aaKnown RBP19.21■□□□□ 0.67
LIME1-205ENST00000480139 KDM1AO60341 852 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 MPC1LP0DKB6 136 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 SPRP35270 261 aaPredicted RBP19.21■□□□□ 0.67
LIME1-205ENST00000480139 CAPZBP47756 277 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 POU4F1Q01851 419 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 FOXC1Q12948 553 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 PLCL1Q15111 1095 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 KLHL38Q2WGJ6 581 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 KLHL35Q6PF15 583 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 PIM3Q86V86 326 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 DCUN1D3Q8IWE4 304 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 GSPT2Q8IYD1 628 aaKnown RBP19.21■□□□□ 0.67
LIME1-205ENST00000480139 PHC3Q8NDX5 983 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 OR5AR1Q8NGP9 310 aa19.21■□□□□ 0.67
LIME1-205ENST00000480139 ATXN7L3BQ96GX2 97 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms