RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 VPS37BQ9H9H4 285 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 MRM3Q9HC36 420 aaKnown RBP11.38□□□□□ -0.59
SKI-202ENST00000478223 BFARQ9NZS9 450 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 SEMA5BQ9P283 1151 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 PILRAQ9UKJ1 303 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 ICKQ9UPZ9 632 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 CDYLQ9Y232 598 aa11.38□□□□□ -0.59
SKI-202ENST00000478223 MED13Q9UHV7 2174 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 BTN3A1O00481 513 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 CES2O00748 559 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 LIN7AO14910 233 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 POLR1CO15160 346 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 TOX3O15405 576 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 RAD1O60671 282 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 VAPBO95292 243 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 DLGAP3O95886 979 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 FTH1P02794 183 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 OR56A5P0C7T3 313 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 EBLN1P0CF75 366 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 LIFP15018 202 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 FOLR1P15328 257 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 NELFEP18615 380 aaKnown RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 CD151P48509 253 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 CYP4F2P78329 520 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 CDK16Q00536 496 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 RPA4Q13156 261 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 CTSL3PQ5NE16 218 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 DNTTIP2Q5QJE6 756 aaKnown RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 LYPLAL1Q5VWZ2 237 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 CEACAM20Q6UY09 585 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 OOSP2Q86WS3 158 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 C17orf53Q8N3J3 647 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 NAT8LQ8N9F0 302 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 LMNTD1Q8N9Z9 388 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 ACVR1CQ8NER5 493 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 TTC9Q92623 222 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 TFGQ92734 400 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.37□□□□□ -0.594e-6■■■■■ 27.4
SKI-202ENST00000478223 ZDHHC12Q96GR4 267 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 SERPINB12Q96P63 405 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 ASPSCR1Q9BZE9 553 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 PLAGL1Q9UM63 463 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
SKI-202ENST00000478223 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 HEBP2Q9Y5Z4 205 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 COLEC10Q9Y6Z7 277 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 PCSK5Q92824 1860 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 SEC16AO15027 2179 aa11.37□□□□□ -0.59
SKI-202ENST00000478223 PIEZO2Q9H5I5 2752 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 LOC101059948A0A1B0GTJ6 334 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 TLCD2A6NGC4 264 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 IFRD1O00458 451 aaPredicted RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 BANF1O75531 89 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 STK17BO94768 372 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 GSTM1P09488 218 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 NDUFS1P28331 727 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 PTGIRP43119 386 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 MAGEA3P43357 314 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 FNTAP49354 379 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 GNG11P61952 73 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 GSTM4Q03013 218 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 KRT33BQ14525 404 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 ZNF789Q5FWF6 425 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 RNASEH2BQ5TBB1 312 aaKnown RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 PAPD7Q5XG87 772 aaKnown RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 CREG2Q8IUH2 290 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 ADGRF3Q8IZF5 1079 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 UNC5BQ8IZJ1 945 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 CACNA2D3Q8IZS8 1091 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 ZFPM2Q8WW38 1151 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 LCN9Q8WX39 176 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 ZNF669Q96BR6 464 aaPredicted RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 SLC41A2Q96JW4 573 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 TEFMQ96QE5 360 aaKnown RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 UBL7Q96S82 380 aaPredicted RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 NAP1L3Q99457 506 aaPredicted RBP11.36□□□□□ -0.59
SKI-202ENST00000478223 CARD6Q9BX69 1037 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 GALPQ9UBC7 116 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 CIDEBQ9UHD4 219 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 POMT2Q9UKY4 750 aa11.36□□□□□ -0.59
SKI-202ENST00000478223 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
SKI-202ENST00000478223 GSAPA4D1B5 854 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 KRT87PA6NCN2 255 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 QSOX1O00391 747 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 PRMT5O14744 637 aaPredicted RBP11.35□□□□□ -0.59
SKI-202ENST00000478223 ATXN7O15265 892 aaPredicted RBP11.35□□□□□ -0.59
SKI-202ENST00000478223 NIPSNAP2O75323 286 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 GPC4O75487 556 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 C1QL1O75973 258 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 KIAA0754O94854 1291 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 FGF5P12034 268 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 PVRP15151 417 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 ST6GAL1P15907 406 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 F8A1P23610 371 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 AOAHP28039 575 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 PEBP1P30086 187 aaKnown RBP11.35□□□□□ -0.59
SKI-202ENST00000478223 TTPAP49638 278 aa11.35□□□□□ -0.59
SKI-202ENST00000478223 EIF3BP55884 814 aaKnown RBP11.35□□□□□ -0.59
SKI-202ENST00000478223 HSPA14Q0VDF9 509 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms