RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLCO1A2P46721 670 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 SERPINB8P50452 374 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 TIAL1Q01085 375 aaKnown RBP eCLIP14.98□□□□□ -0.01
SEC13-215ENST00000477547 GBX1Q14549 363 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 ACSBG2Q5FVE4 666 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 DUS1LQ6P1R4 473 aaKnown RBP14.98□□□□□ -0.01
SEC13-215ENST00000477547 FBXO38Q6PIJ6 1188 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 WASH2PQ6VEQ5 465 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 CMC1Q7Z7K0 106 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 VRK3Q8IV63 474 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 CEP97Q8IW35 865 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 SLC35F3Q8IY50 421 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 NAGSQ8N159 534 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
SEC13-215ENST00000477547 SLC37A2Q8TED4 501 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
SEC13-215ENST00000477547 INPP5DQ92835 1189 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 GATA6Q92908 595 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 C12orf66Q96MD2 445 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 POPDC3Q9HBV1 291 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 WASH6PQ9NQA3 447 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 IMP3Q9NV31 184 aaKnown RBP14.98□□□□□ -0.01
SEC13-215ENST00000477547 KLHL42Q9P2K6 505 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 CDYLQ9Y232 598 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 DHRS7Q9Y394 339 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 NBEAQ8NFP9 2946 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 RP1P56715 2156 aa14.98□□□□□ -0.01
SEC13-215ENST00000477547 DMXL2Q8TDJ6 3036 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 OR52A4PA6NMU1 304 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 TRIM49D1C9J1S8 452 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 IFRD1O00458 451 aaPredicted RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 SLCO2B1O94956 709 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 MTHFD1P11586 935 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 ENO3P13929 434 aaPredicted RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 H2AFXP16104 143 aaPredicted RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 RGS4P49798 205 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 MAZP56270 477 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 RAB10P61026 200 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 ZKSCAN8Q15776 578 aaPredicted RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 C14orf28Q4W4Y0 310 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 ADGRD1Q6QNK2 874 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 PAQR3Q6TCH7 311 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 ABRAXAS1Q6UWZ7 409 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 TRIM48Q8IWZ4 208 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 SFRP1Q8N474 314 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 MAPK15Q8TD08 544 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 ZCCHC14Q8WYQ9 949 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 CXorf40BQ96DE9 158 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 LINGO1Q96FE5 620 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 SCNM1Q9BWG6 230 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 STN1Q9H668 368 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 GPAMQ9HCL2 828 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 LATS2Q9NRM7 1088 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 SCHIP1Q9P0W5 487 aaPredicted RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 FTSJ1Q9UET6 329 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 TBK1Q9UHD2 729 aa14.97□□□□□ -0.01
SEC13-215ENST00000477547 RUVBL2Q9Y230 463 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 CFAP20Q9Y6A4 193 aaKnown RBP14.97□□□□□ -0.01
SEC13-215ENST00000477547 KIR2DS5A0A0G2JLQ3 304 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 A0A0G2JNG1 304 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 IQANK1A0A1B0GTG1 560 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 HMX2A2RU54 273 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 OR5K4A6NMS3 321 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 KIR2DS3K7RE56 304 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 EIF3FO00303 357 aaPredicted RBP14.96□□□□□ -0.01
SEC13-215ENST00000477547 SH3BP5O60239 455 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 CDH16O75309 829 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 CBSLP0DN79 551 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 CBSP35520 551 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 SKIV2L2P42285 1042 aaKnown RBP14.96□□□□□ -0.01
SEC13-215ENST00000477547 BIRC2Q13490 618 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 KIR2DS5Q14953 304 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 CLCA4Q14CN2 919 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 RPE65Q16518 533 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 TAF1BQ53T94 588 aaPredicted RBP14.96□□□□□ -0.01
SEC13-215ENST00000477547 LGSNQ5TDP6 509 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 LRRC8EQ6NSJ5 796 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 RAPH1Q70E73 1250 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 PIWIL4Q7Z3Z4 852 aaKnown RBP14.96□□□□□ -0.01
SEC13-215ENST00000477547 GPR156Q8NFN8 814 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 APOLD1Q96LR9 279 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 SNX15Q9NRS6 342 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 POT1Q9NUX5 634 aa14.96□□□□□ -0.01
SEC13-215ENST00000477547 DSPP15924 2871 aaKnown RBP14.96□□□□□ -0.01
SEC13-215ENST00000477547 ASXL3Q9C0F0 2248 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 TRBV23OR9-2A0A075B6M9 112 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 TMEM8BA6NDV4 472 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 RASGRF2O14827 1237 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 TCEA3O75764 348 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 ALDOAP04075 364 aaKnown RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 SNRPAP09012 282 aaKnown RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 RPIAP49247 311 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 DAB2P98082 770 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 NR0B2Q15466 257 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 PROX2Q3B8N5 592 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 CAPRIN2Q6IMN6 1127 aaKnown RBP14.95□□□□□ -0.02
SEC13-215ENST00000477547 IYDQ6PHW0 289 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 DBX2Q6ZNG2 339 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 SLC9B2Q86UD5 537 aa14.95□□□□□ -0.02
SEC13-215ENST00000477547 TDRPQ86YL5 185 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms