RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 HSD11B2P80365 405 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 GPS1Q13098 491 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 TUBB3Q13509 450 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 TGIF1Q15583 401 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCM2-208ENST00000476594 SOWAHCQ53LP3 525 aaPredicted RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 PTRHD1Q6GMV3 140 aaKnown RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 DUS1LQ6P1R4 473 aaKnown RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 CASC4Q6P4E1 433 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 TTC23LQ6PF05 361 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 CCDC137Q6PK04 289 aaKnown RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 TBC1D21Q8IYX1 336 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 SLC35F6Q8N357 371 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 RAB42Q8N4Z0 105 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 CLDN19Q8N6F1 224 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 PRELID2Q8N945 189 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 ACTRT1Q8TDG2 376 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 ASZ1Q8WWH4 475 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 NKD1Q969G9 470 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 RUNDC3BQ96NL0 473 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 CATSPER2Q96P56 530 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 PHF12Q96QT6 1004 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 CTRCQ99895 268 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 OR52A5Q9H2C5 316 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 TFB2MQ9H5Q4 396 aaKnown RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 C1GALT1Q9NS00 363 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 SIDT1Q9NXL6 827 aaKnown RBP9.95□□□□□ -0.82
CCM2-208ENST00000476594 SEMA5BQ9P283 1151 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 GNPTGQ9UJJ9 305 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 PILRAQ9UKJ1 303 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 PCDHB3Q9Y5E6 796 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
CCM2-208ENST00000476594 IGSF10Q6WRI0 2623 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 OR51F1A6NGY5 319 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 H3BMM5 538 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 CD3EAPO15446 510 aaKnown RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 PHF2O75151 1096 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 FGF5P12034 268 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 MLNP12872 115 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 COILP38432 576 aaPredicted RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 GRIA1P42261 906 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 VPS41P49754 854 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 C19orf57Q0VDD7 668 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 PPP1R7Q15435 360 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 DNAJC21Q5F1R6 531 aaKnown RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 C6orf15Q6UXA7 325 aaPredicted RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 PRUNE1Q86TP1 453 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 VASH2Q86V25 355 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 AMIGO1Q86WK6 493 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 GLIS1Q8NBF1 620 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 OR4E2Q8NGC2 313 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 OR52E1Q8NGJ3 308 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 JPH3Q8WXH2 748 aaPredicted RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 SEC14L1Q92503 715 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 N4BP2L2Q92802 583 aaPredicted RBP9.94□□□□□ -0.82
CCM2-208ENST00000476594 SLC41A2Q96JW4 573 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 FOPNLQ96NB1 174 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 OSBPL9Q96SU4 736 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 TCF12Q99081 682 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 MAP3K3Q99759 626 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 HGH1Q9BTY7 390 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 KIFC1Q9BW19 673 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 CARD6Q9BX69 1037 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 CHRAC1Q9NRG0 131 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 SLC2A6Q9UGQ3 507 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 LNPEPQ9UIQ6 1025 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 KCND3Q9UK17 655 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 POMT2Q9UKY4 750 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 SNX12Q9UMY4 172 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 SOX13Q9UN79 622 aa9.94□□□□□ -0.82
CCM2-208ENST00000476594 KIF1CO43896 1103 aaKnown RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 PRSS56P0CW18 603 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 POLR2CP19387 275 aaPredicted RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 MGAT1P26572 445 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 MAGEA6P43360 314 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 PREPP48147 710 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 TUBB4BP68371 445 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 THOC5Q13769 683 aaKnown RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 TUBB2AQ13885 445 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 TRIP13Q15645 432 aaPredicted RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 KIAA0930Q6ICG6 404 aaPredicted RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 OTOAQ7RTW8 1153 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 PCGF5Q86SE9 256 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 REXO1L1PQ8IX06 675 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 D2HGDHQ8N465 521 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 LILRA3Q8N6C8 439 aaPredicted RBP9.93□□□□□ -0.82
CCM2-208ENST00000476594 PHC3Q8NDX5 983 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 MCUQ8NE86 351 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 OR5K2Q8NHB8 316 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 CALML6Q8TD86 181 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 MAGEC3Q8TD91 643 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 NAT14Q8WUY8 206 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 SLC22A18Q96BI1 424 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 SLC45A3Q96JT2 553 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 ZNF778Q96MU6 729 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 TUBB2BQ9BVA1 445 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 RAB11FIP5Q9BXF6 653 aa9.93□□□□□ -0.82
CCM2-208ENST00000476594 AP1M1Q9BXS5 423 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms