RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PLEKHA8Q96JA3 519 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 TMEM74Q96NL1 305 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 FARSBQ9NSD9 589 aaKnown RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 PAIP2BQ9ULR5 123 aaKnown RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 PKP3Q9Y446 797 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 ZFC3H1O60293 1989 aaKnown RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 NUP214P35658 2090 aaPredicted RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 TMX2-CTNND1H3BSU7 103 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 MTX2O75431 263 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 FGF18O76093 207 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 INHBBP09529 407 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 RFC2P35250 354 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 HMGCLP35914 325 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 GGT5P36269 586 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 ZFP36L2P47974 494 aaKnown RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 HSPA7P48741 367 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 GRSF1Q12849 480 aaKnown RBP eCLIP12.23□□□□□ -0.45
RNF220-211ENST00000474956 SBSNQ6UWP8 590 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 DET1Q7L5Y6 550 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 IFNEQ86WN2 208 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 TMEM25Q86YD3 366 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 GPR26Q8NDV2 337 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 DNAJB14Q8TBM8 379 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 PAWRQ96IZ0 340 aaKnown RBP12.23□□□□□ -0.45
RNF220-211ENST00000474956 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 ZFYVE1Q9HBF4 777 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 FAM8A1Q9UBU6 413 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 SLC30A1Q9Y6M5 507 aa12.23□□□□□ -0.45
RNF220-211ENST00000474956 BOLA2-SMG1P6H3BVE0 249 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 FFAR3O14843 346 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 INPP4BO15327 924 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 GPR42O15529 346 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 UMPSP11172 480 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 RPS9P46781 194 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 RPS6KA2Q15349 733 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 MOGQ16653 247 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 CYBRD1Q53TN4 286 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 TBC1D21Q8IYX1 336 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 OFCC1Q8IZS5 231 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 HERC2P3Q9BVR0 1158 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 TRIM54Q9BYV2 358 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 LINC00597Q9H2U6 94 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 POPDC3Q9HBV1 291 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 SDR39U1Q9NRG7 319 aaPredicted RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 PCDHA9Q9Y5H5 950 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 V9GYQ6 96 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 SLC25A14O95258 325 aaPredicted RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 OLFM2O95897 454 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 MT-ND1P03886 318 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 TFPTP0C1Z6 253 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 NCK1P16333 377 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 LBPP18428 481 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 WEE1P30291 646 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 HLCSP50747 726 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 NTHL1P78549 312 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 CDKN3Q16667 212 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 DCAF4L2Q8NA75 395 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 SLC52A3Q9NQ40 469 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 RIMKLBQ9ULI2 386 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 LEFTY2O00292 366 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 SNX2O60749 519 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 LILRB3O75022 631 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 RSL1D1O76021 490 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 C8AP07357 584 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 MTHFD1P11586 935 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 ERVFC1P60507 584 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 BCL2L1Q07817 233 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 PDCD4Q53EL6 469 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 INO80DQ53TQ3 878 aaPredicted RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 CCNYL2Q5T2Q4 361 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 ZNF697Q5TEC3 545 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 PTRHD1Q6GMV3 140 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 XKR5Q6UX68 686 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 DDX53Q86TM3 631 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 PTRH1Q86Y79 214 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 ZNF366Q8N895 744 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 NAT16Q8N8M0 369 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 LEMD2Q8NC56 503 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 CHST14Q8NCH0 376 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 PAPD5Q8NDF8 572 aaKnown RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 TSPEARQ8WU66 669 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
RNF220-211ENST00000474956 COMMD10Q9Y6G5 202 aa12.22□□□□□ -0.45
RNF220-211ENST00000474956 ZBBXA8MT70 800 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 OR7A17O14581 309 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 TAPBPO15533 448 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 COQ9O75208 318 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 ZBTB11O95625 1053 aaPredicted RBP12.21□□□□□ -0.45
RNF220-211ENST00000474956 TRBC1P01850 177 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 CAPN1P07384 714 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 LINC00271P0C7V0 271 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 OCM2P0CE71 109 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 OCMP0CE72 109 aaPredicted RBP12.21□□□□□ -0.45
RNF220-211ENST00000474956 LHCGRP22888 699 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 NFATC2Q13469 925 aa12.21□□□□□ -0.45
RNF220-211ENST00000474956 AASDHQ4L235 1098 aaPredicted RBP12.21□□□□□ -0.45
RNF220-211ENST00000474956 TIGD2Q4W5G0 525 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms