RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 UNC5DQ6UXZ4 953 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 NEK10Q6ZWH5 1172 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 OTOAQ7RTW8 1153 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TRIM48Q8IWZ4 208 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 IFT20Q8IY31 132 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TBC1D21Q8IYX1 336 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 OR4D9Q8NGE8 314 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 GIMAP7Q8NHV1 300 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 C9orf72Q96LT7 481 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 DEPDC7Q96QD5 511 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 FMO2Q99518 471 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TFB2MQ9H5Q4 396 aaKnown RBP16.51■□□□□ 0.23
SCAF11-206ENST00000474828 SEMA5BQ9P283 1151 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 MTRF1LQ9UGC7 380 aaKnown RBP16.51■□□□□ 0.23
SCAF11-206ENST00000474828 ANGPTL2Q9UKU9 493 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 ENTPD2Q9Y5L3 495 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 PSAT1Q9Y617 370 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TMX2-CTNND1H3BSU7 103 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 CAPNS1P04632 268 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 TPBGLP0DKB5 382 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 ALDH4A1P30038 563 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 SKIV2L2P42285 1042 aaKnown RBP16.5■□□□□ 0.23
SCAF11-206ENST00000474828 LIMK2P53671 638 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 HSPA14Q0VDF9 509 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 TMED2Q15363 201 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 ST3GAL2Q16842 350 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 TMEM71Q6P5X7 295 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 IGF2-ASQ6U949 168 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 NAPRTQ6XQN6 538 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 ZBTB2Q8N680 514 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 Q8N9G6 341 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-206ENST00000474828 ACVR1CQ8NER5 493 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 OR10G6Q8NH81 332 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 OR5K2Q8NHB8 316 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 CD200R1Q8TD46 325 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 LIN37Q96GY3 246 aaPredicted RBP16.5■□□□□ 0.23
SCAF11-206ENST00000474828 SLC30A3Q99726 388 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 MENTQ9BUN1 341 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 TBC1D10AQ9BXI6 508 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 IMP3Q9NV31 184 aaKnown RBP16.5■□□□□ 0.23
SCAF11-206ENST00000474828 ZFATQ9P243 1243 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 FAM8A1Q9UBU6 413 aa16.5■□□□□ 0.23
SCAF11-206ENST00000474828 CFAP20Q9Y6A4 193 aaKnown RBP16.5■□□□□ 0.23
SCAF11-206ENST00000474828 FREM2Q5SZK8 3169 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 DUX1O43812 170 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CSO75390 466 aaKnown RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 UBXN7O94888 489 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 F7P08709 466 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CBSLP0DN79 551 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 HOXB3P14651 431 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 JUPP14923 745 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 ITGB6P18564 788 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CBSP35520 551 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CAPZBP47756 277 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CLDN6P56747 220 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 BIRC2Q13490 618 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 NAB1Q13506 487 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 TRA2AQ13595 282 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 GRB7Q14451 532 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 RTP5Q14D33 572 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 SYTL3Q4VX76 610 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 CCDC157Q569K6 752 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 DUS1LQ6P1R4 473 aaKnown RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 PIM3Q86V86 326 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 ZC3HC1Q86WB0 502 aaKnown RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 ZNF761Q86XN6 746 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-206ENST00000474828 INPP5DQ92835 1189 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 GATA6Q92908 595 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 TMEM74Q96NL1 305 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 NUDT22Q9BRQ3 303 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 TXLNGYQ9BZA5 131 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 NRSN2Q9GZP1 204 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 SLC17A6Q9P2U8 582 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 POLG2Q9UHN1 485 aa16.49■□□□□ 0.23
SCAF11-206ENST00000474828 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 A0A1W2PNU3 283 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CXorf49A8MYA2 514 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 TOX3O15405 576 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 ANKRD34CP0C6C1 535 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 THRAP10827 490 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 ENO3P13929 434 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CHRM3P20309 590 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 FDXRP22570 491 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CSE1LP55060 971 aaKnown RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 RBM20Q5T481 1227 aaKnown RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 NKAIN2Q5VXU1 208 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CYHR1Q6ZMK1 362 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 ARHGAP22Q7Z5H3 698 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 B3GNT8Q7Z7M8 397 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 FBXO15Q8NCQ5 510 aaPredicted RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 IFT81Q8WYA0 676 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 CCDC68Q9H2F9 335 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 RHOJQ9H4E5 214 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 PPANQ9NQ55 473 aaKnown RBP16.48■□□□□ 0.23
SCAF11-206ENST00000474828 NINJ2Q9NZG7 142 aa16.48■□□□□ 0.23
SCAF11-206ENST00000474828 DKK4Q9UBT3 224 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms