RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 BRD2P25440 801 aaKnown RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 RFC3P40938 356 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 OCRLQ01968 901 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 BCL2L1Q07817 233 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 MAPKAPK3Q16644 382 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ME3Q16798 604 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 DEFB110Q30KQ9 67 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 GXYLT1Q4G148 440 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 INO80DQ53TQ3 878 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 FCRLBQ6BAA4 426 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 CRTC3Q6UUV7 619 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ABRAXAS1Q6UWZ7 409 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 C20orf204Q6ZNR8 217 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 CDHR3Q6ZTQ4 885 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 OVCH1Q7RTY7 1134 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ARHGAP12Q8IWW6 846 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF655Q8N720 491 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 FBXO18Q8NFZ0 1043 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 EXD1Q8NHP7 514 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 SEMA4DQ92854 862 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 KIAA1191Q96A73 305 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 FKBP10Q96AY3 582 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 RBMXL1Q96E39 390 aaKnown RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 INTS4Q96HW7 963 aaKnown RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 C1orf74Q96LT6 269 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ZSWIM1Q9BR11 485 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 CRB3Q9BUF7 120 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 MAGEH1Q9H213 219 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 ZFYVE1Q9HBF4 777 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 PIGVQ9NUD9 493 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 SPTLC3Q9NUV7 552 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 IRAK4Q9NWZ3 460 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 CTSFQ9UBX1 484 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 FOXD3Q9UJU5 478 aaPredicted RBP6.27□□□□□ -1.41
HDAC3-206ENST00000471968 VPS9D1Q9Y2B5 631 aa6.27□□□□□ -1.41
HDAC3-206ENST00000471968 HYKKA2RU49 373 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ZSCAN9O15535 394 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 NUAK1O60285 661 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ONECUT2O95948 504 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ALBP02768 609 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CTSBP07858 339 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF8P17098 575 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 POLR2CP19387 275 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ITGAXP20702 1163 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 IGFBP5P24593 272 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CD96P40200 585 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ACADSBP45954 432 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 RGRP47804 291 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 RPL34P49207 117 aaKnown RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 EFNA3P52797 238 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 EEF1A2Q05639 463 aaKnown RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 FASTKQ14296 549 aaKnown RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 GALNT3Q14435 633 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 PTPRRQ15256 657 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CNGA2Q16280 664 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM249Q2WGJ8 235 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 FBXL19-AS1Q494R0 122 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CMPK2Q5EBM0 449 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 BRMS1LQ5PSV4 323 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 FAM120AOSQ5T036 256 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 RTL6Q6ICC9 239 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 SLC25A25Q6KCM7 469 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 RIPOR1Q6ZS17 1223 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 OTOAQ7RTW8 1153 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 BTLAQ7Z6A9 289 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 TSPAN33Q86UF1 283 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 PRSS58Q8IYP2 241 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM171Q8WVE6 324 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 UTP23Q9BRU9 249 aaKnown RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 KLC2Q9H0B6 622 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CXorf56Q9H5V9 222 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 CHODLQ9H9P2 273 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF701Q9NV72 531 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 C6orf203Q9P0P8 240 aaPredicted RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 MTRF1LQ9UGC7 380 aaKnown RBP6.26□□□□□ -1.41
HDAC3-206ENST00000471968 KIAA1257Q9ULG3 409 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 WDR37Q9Y2I8 494 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 PCDHGB1Q9Y5G3 927 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 DSCAMO60469 2012 aa6.26□□□□□ -1.41
HDAC3-206ENST00000471968 DNAH1Q9P2D7 4330 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 TMEM89A2RUT3 159 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 NPIPB15A6NHN6 443 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 H3BMH7 237 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 PSMD11O00231 422 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 QSOX1O00391 747 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 DVL2O14641 736 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CASKO14936 926 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 LMX1BO60663 402 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 PYGLP06737 847 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 ARAFP10398 606 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 ZNF16P17020 682 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 TFE3P19532 575 aaPredicted RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 LONP1P36776 959 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CCNFP41002 786 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 HALP42357 657 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 MAPKAPK2P49137 400 aa6.25□□□□□ -1.41
HDAC3-206ENST00000471968 CARSP49589 748 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 NR0B1P51843 470 aaKnown RBP6.25□□□□□ -1.41
HDAC3-206ENST00000471968 SORDQ00796 357 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms