RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 WDR74Q6RFH5 385 aaPredicted RBP19.25■□□□□ 0.67
HDAC7-220ENST00000471235 UNQ6494/PRO21346Q6UXR6 183 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 KIAA0408Q6ZU52 694 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 OTOAQ7RTW8 1153 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 CCDC25Q86WR0 208 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 LRRN4CLQ8ND94 238 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 PHC3Q8NDX5 983 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 ZFPM2Q8WW38 1151 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 NCSTNQ92542 709 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 TFGQ92734 400 aaPredicted RBP19.25■□□□□ 0.67
HDAC7-220ENST00000471235 NXPE2Q96DL1 559 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 FERD3LQ96RJ6 166 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 HGH1Q9BTY7 390 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 NRSN2Q9GZP1 204 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 MVB12BQ9H7P6 319 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
HDAC7-220ENST00000471235 FAM114A2Q9NRY5 505 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 GALPQ9UBC7 116 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 MED16Q9Y2X0 877 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 COLEC10Q9Y6Z7 277 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 CCDC187A0A096LP49 1063 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 PMS2P1A4D2B8 440 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 TMX2-CTNND1H3BSU7 103 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 KPNA5O15131 536 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 SLCO2B1O94956 709 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 THRAP10827 490 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 AMD1P17707 334 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 MPSTP25325 297 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 SSTR1P30872 391 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 ABCG1P45844 678 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 GFERP55789 205 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 MGAT5Q09328 741 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 GBX1Q14549 363 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 C3orf38Q5JPI3 329 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 PLEKHS1Q5SXH7 462 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 TMEM71Q6P5X7 295 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 GALNT7Q86SF2 657 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 ACVR1CQ8NER5 493 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 OR5AR1Q8NGP9 310 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 C9orf72Q96LT7 481 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 AARSD1Q9BTE6 412 aaKnown RBP19.24■□□□□ 0.67
HDAC7-220ENST00000471235 STRADBQ9C0K7 418 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 CCDC68Q9H2F9 335 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 L2HGDHQ9H9P8 463 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 MOCS1Q9NZB8 636 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 SATB2Q9UPW6 733 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 ASF1AQ9Y294 204 aa19.24■□□□□ 0.67
HDAC7-220ENST00000471235 FRYQ5TBA9 3013 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 CHD8Q9HCK8 2581 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 E5RI56 91 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 ZNF500O60304 480 aaPredicted RBP19.23■□□□□ 0.67
HDAC7-220ENST00000471235 CHRM3P20309 590 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 CLCN7P51798 805 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 GABREP78334 506 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 C16orf72Q14CZ0 275 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 RTP5Q14D33 572 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 ZBTB2Q8N680 514 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 GIMAP7Q8NHV1 300 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 KCNJ9Q92806 393 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 NDNQ99608 321 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 SLC30A3Q99726 388 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 LATS2Q9NRM7 1088 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 PDP2Q9P2J9 529 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 COMMD10Q9Y6G5 202 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 PCM1Q15154 2024 aa19.23■□□□□ 0.67
HDAC7-220ENST00000471235 C9P02748 559 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 AHSGP02765 367 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 MPOP05164 745 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 MAGEA4P43358 317 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 GPX6P59796 221 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 PPP1CAP62136 330 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 TRA2AQ13595 282 aaKnown RBP eCLIP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 RBM20Q5T481 1227 aaKnown RBP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 SPNS2Q8IVW8 549 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 PALM2Q8IXS6 379 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 SIDT2Q8NBJ9 832 aaKnown RBP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 RCBTB1Q8NDN9 531 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 OR52E1Q8NGJ3 308 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 OR5K2Q8NHB8 316 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 WDR36Q8NI36 951 aaKnown RBP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 NRTNQ99748 197 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 TRIT1Q9H3H1 467 aaKnown RBP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 POLR1BQ9H9Y6 1135 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 SMYD2Q9NRG4 433 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 ZFATQ9P243 1243 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 TSR3Q9UJK0 312 aaKnown RBP19.22■□□□□ 0.67
HDAC7-220ENST00000471235 PSAT1Q9Y617 370 aa19.22■□□□□ 0.67
HDAC7-220ENST00000471235 OR5K3A6NET4 321 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 AGRPO00253 132 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 CAPN5O15484 640 aaPredicted RBP19.21■□□□□ 0.67
HDAC7-220ENST00000471235 ATP5DP30049 168 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 ECHS1P30084 290 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 PRKG2Q13237 762 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 EIF3IQ13347 325 aaKnown RBP19.21■□□□□ 0.67
HDAC7-220ENST00000471235 ACSBG2Q5FVE4 666 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 SNAP47Q5SQN1 464 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 UNC5DQ6UXZ4 953 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 RAB11FIP2Q7L804 512 aa19.21■□□□□ 0.67
HDAC7-220ENST00000471235 OOSP2Q86WS3 158 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms