RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 USP39Q53GS9 565 aaKnown RBP10.37□□□□□ -0.75
RRP1B-202ENST00000470886 BORAQ6PGQ7 559 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 GALNT5Q7Z7M9 940 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 GRPEL2Q8TAA5 225 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 C1orf74Q96LT6 269 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 SGK2Q9HBY8 427 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 ZNF624Q9P2J8 865 aaPredicted RBP10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CYTH4Q9UIA0 394 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 PADI3Q9ULW8 664 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CFL2Q9Y281 166 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 SNX10Q9Y5X0 201 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 STMND1H3BQB6 276 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 LRATO95237 230 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CCNDBP1O95273 360 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 C1RP00736 705 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 PRLP01236 227 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CBSLP0DN79 551 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 NR2F1P10589 423 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CBSP35520 551 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CHRNA4P43681 627 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 HNMTP50135 292 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 SIRPB2Q5JXA9 342 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 PRAMEF19Q5SWL8 479 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 PAQR3Q6TCH7 311 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 PLET1Q6UQ28 207 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CHSY3Q70JA7 882 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 AHSA2Q719I0 299 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 ZNF438Q7Z4V0 828 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 FGD2Q7Z6J4 655 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 C11orf74Q86VG3 221 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 SERPINA9Q86WD7 417 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 RASAL3Q86YV0 1011 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 TRAPPC5Q8IUR0 188 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 TRIM48Q8IWZ4 208 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 OR8J3Q8NGG0 315 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 BIRC7Q96CA5 298 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 ISOC1Q96CN7 298 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 CEP295NLQ96MC4 621 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 COPS4Q9BT78 406 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 KCNK13Q9HB14 408 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
RRP1B-202ENST00000470886 EPORP19235 508 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 NUMBP49757 651 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 FCHO2Q0JRZ9 810 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 ABHD18Q0P651 414 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 STX4Q12846 297 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SNX20Q7Z614 316 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 PHACTR4Q8IZ21 702 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 BCL7BQ9BQE9 202 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 PCDHGA11Q9Y5H2 935 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 MRPL42Q9Y6G3 142 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 EFCAB9A8MZ26 197 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 BTBD19C9JJ37 291 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 FFAR2O15552 330 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 UGT2B4P06133 528 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 HSD17B1P14061 328 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 GCAP28676 217 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 STC1P52823 247 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 MTPNP58546 118 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 PTSQ03393 145 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SERINC3Q13530 473 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 CEACAM7Q14002 265 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SDHAF4Q5VUM1 108 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SIDT2Q8NBJ9 832 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 TXNDC5Q8NBS9 432 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 STON2Q8WXE9 905 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 ZNF558Q96NG5 402 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 RASSF1Q9NS23 344 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 AKAP7Q9P0M2 348 aaPredicted RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 TMEM233B4DJY2 109 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 DYRK3O43781 588 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 MTHFD1P11586 935 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 BMP2P12643 396 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 NOS3P29474 1203 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 CORO1AP31146 461 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SKP1P63208 163 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 PLEKHG4Q58EX7 1191 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 LRRC70Q7Z2Q7 622 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 FAR1Q8WVX9 515 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 TP53INP1Q96A56 240 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 RPRD1BQ9NQG5 326 aaKnown RBP10.36□□□□□ -0.75
RRP1B-202ENST00000470886 OGDHLQ9ULD0 1010 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 SLC27A5Q9Y2P5 690 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 NR2E3Q9Y5X4 410 aa10.36□□□□□ -0.75
RRP1B-202ENST00000470886 ILVBLA1L0T0 632 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 SH3PXD2BA1X283 911 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 GRM6O15303 877 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 XYLBO75191 536 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 UGT2B17O75795 530 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 CCNB2O95067 398 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 FGF19O95750 216 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 DHFRP00374 187 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 MYL9P24844 172 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 PIK3CBP42338 1070 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 NPTX1Q15818 432 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 EML3Q32P44 896 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 TIGD5Q53EQ6 642 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 SLC34A3Q8N130 599 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 ITPKCQ96DU7 683 aa10.35□□□□□ -0.75
RRP1B-202ENST00000470886 SUSD3Q96L08 255 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms