RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CNKSR3Q6P9H4 555 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 SUSD1Q6UWL2 747 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 HTR3DQ70Z44 454 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 DDX53Q86TM3 631 aaKnown RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 TMC8Q8IU68 726 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 PACRGLQ8N7B6 248 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 PAPD5Q8NDF8 572 aaKnown RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CLHC1Q8NHS4 586 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CYGBQ8WWM9 190 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 MYLIPQ8WY64 445 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 VPS50Q96JG6 964 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 HTATIP2Q9BUP3 242 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CHID1Q9BWS9 393 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 KIAA1522Q9P206 1035 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 ZNF490Q9ULM2 529 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 K7EPI3 171 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 ARNTLO00327 626 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 TGM5O43548 720 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CDH2P19022 906 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 EPORP19235 508 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 SERPINA4P29622 427 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 PTSQ03393 145 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 SULT1C3Q6IMI6 304 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 DET1Q7L5Y6 550 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 ITIH5Q86UX2 942 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 ZNF786Q8N393 782 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 LIX1Q8N485 282 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 FAM86B1Q8N7N1 296 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 FIBINQ8TAL6 211 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 MAGEE2Q8TD90 523 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 MRPS31Q92665 395 aaKnown RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CARS2Q9HA77 564 aaKnown RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 DDX18Q9NVP1 670 aaKnown RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 PTTG2Q9NZH5 202 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 HECAQ9UBI9 543 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-205ENST00000469687 CCL26Q9Y258 94 aa14.39□□□□□ -0.11
CBWD3-205ENST00000469687 C5orf42Q9H799 3197 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 SNAP29O95721 258 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 NPPAP01160 153 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 PCNAP12004 261 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 MYF6P23409 242 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 SLC5A2P31639 672 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 CCR7P32248 378 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 CSNK1DP48730 415 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 PWP1Q13610 501 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 AASDHQ4L235 1098 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 SPANXN4Q5MJ08 99 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 B3GNT6Q6ZMB0 384 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 REM2Q8IYK8 340 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 TBC1D21Q8IYX1 336 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 RGL4Q8IZJ4 473 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 SLC13A3Q8WWT9 602 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 PPP3R2Q96LZ3 170 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 NSMCE2Q96MF7 247 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 CLK4Q9HAZ1 481 aaKnown RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 CD84Q9UIB8 345 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 PCDHB3Q9Y5E6 796 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 MAGED1Q9Y5V3 778 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-205ENST00000469687 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
CBWD3-205ENST00000469687 AGAP14A8MT82 685 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 ULK1O75385 1050 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 LDLRP01130 860 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 FCGR1AP12314 374 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 ALDH3B2P48448 385 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 CPSF6Q16630 551 aaKnown RBP eCLIP14.37□□□□□ -0.11
CBWD3-205ENST00000469687 GTDC1Q4AE62 458 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 MPPE1Q53F39 396 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 PROSER1Q86XN7 944 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 MSRB3Q8IXL7 192 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 RIMKLAQ8IXN7 391 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 CPXM2Q8N436 756 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 GTF2H4Q92759 462 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 ASIC4Q96FT7 647 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 ZNF583Q96ND8 569 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 HAUS8Q9BT25 410 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 OCEL1Q9H607 264 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 ZDHHC6Q9H6R6 413 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 SLC6A13Q9NSD5 602 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 TMEM45AQ9NWC5 275 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 TMPRSS11EQ9UL52 423 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 OGDHLQ9ULD0 1010 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 LEFTY2O00292 366 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 MANBAO00462 879 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 AREL1O15033 823 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 RGS14O43566 566 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 LILRB3O75022 631 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 SEC22BO75396 215 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 MTX2O75431 263 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 B3GALT4O96024 378 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 UMPSP11172 480 aa14.37□□□□□ -0.11
CBWD3-205ENST00000469687 NFKBIAP25963 317 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms