RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 CD244Q9BZW8 370 aa18.57■□□□□ 0.56
SMC4-209ENST00000468653 MEAF6Q9HAF1 191 aa18.57■□□□□ 0.56
SMC4-209ENST00000468653 ARL8BQ9NVJ2 186 aa18.57■□□□□ 0.56
SMC4-209ENST00000468653 OPTCQ9UBM4 332 aa18.57■□□□□ 0.56
SMC4-209ENST00000468653 EYSQ5T1H1 3165 aa18.57■□□□□ 0.56
SMC4-209ENST00000468653 H3BM21 787 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 SDHDO14521 159 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 MATN4O95460 622 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 ESRRBO95718 433 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 T-ENOLP0DO92 83 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 C7P10643 843 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 MAP4P27816 1152 aaKnown RBP18.56■□□□□ 0.56
SMC4-209ENST00000468653 MAPK9P45984 424 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 TBCCQ15814 346 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 PRPF38BQ5VTL8 546 aaKnown RBP18.56■□□□□ 0.56
SMC4-209ENST00000468653 GPR153Q6NV75 609 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 SYVN1Q86TM6 617 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 ZNF547Q8IVP9 402 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 SLC22A15Q8IZD6 547 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 TCAIMQ8N3R3 496 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 FLCNQ8NFG4 579 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 UBTD2Q8WUN7 234 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 HMGB4Q8WW32 186 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 ATP6V1E2Q96A05 226 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 TMEM79Q9BSE2 394 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 CCDC106Q9BWC9 280 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 NOL11Q9H8H0 719 aaKnown RBP18.56■□□□□ 0.56
SMC4-209ENST00000468653 PHPT1Q9NRX4 125 aaPredicted RBP18.56■□□□□ 0.56
SMC4-209ENST00000468653 OR1A2Q9Y585 309 aa18.56■□□□□ 0.56
SMC4-209ENST00000468653 C17orf113A0A1B0GUU1 675 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 GABRG2P18507 467 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PDHA2P29803 388 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 TRIM23P36406 574 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PKNOX1P55347 436 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 AP1S2P56377 157 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 TFF2Q03403 129 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PLA2G4EQ3MJ16 856 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 ZNF658BQ4V348 819 aaPredicted RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 KANK2Q63ZY3 851 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 METTL2BQ6P1Q9 378 aaKnown RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 Q6ZS52 159 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 OR2L2Q8NH16 312 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 MAELQ96JY0 434 aaKnown RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 ZNF382Q96SR6 550 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 POLMQ9NP87 494 aaPredicted RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 GULP1Q9UBP9 304 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 STK38LQ9Y2H1 464 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PRKAB1Q9Y478 270 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 DNAJC15Q9Y5T4 150 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 A0A1B0GTL3 188 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 MGAT4DA6NG13 374 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 CAPN14A8MX76 684 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PRR5-ARHGAP8B1AHC4 643 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 SLC31A1O15431 190 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PSIP1O75475 530 aaKnown RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 STK16O75716 305 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 FSBPO95073 299 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 CATP04040 527 aaKnown RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 CHRNB1P11230 501 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PRDX3P30048 256 aaKnown RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 GDF5P43026 501 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 HNMTP50135 292 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 RASSF2P50749 326 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 TPMTP51580 245 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 INHBCP55103 352 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 FOXA1P55317 472 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 ARHGAP8P85298 464 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PLOD1Q02809 727 aaPredicted RBP18.55■□□□□ 0.56
SMC4-209ENST00000468653 UGT3A2Q3SY77 523 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 LRRTM4Q86VH4 590 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 PGBD3Q8N328 593 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 CEP70Q8NHQ1 597 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 HM13Q8TCT9 377 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 TWIST2Q8WVJ9 160 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 KLHL29Q96CT2 875 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 C19orf60Q96EN9 201 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 KCNA7Q96RP8 456 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 IPPKQ9H8X2 491 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 CD93Q9NPY3 652 aa18.55■□□□□ 0.56
SMC4-209ENST00000468653 NUMA1Q14980 2115 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 K7EPI3 171 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 CHUKO15111 745 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 HNRNPCL1O60812 293 aaKnown RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 DNAJC8O75937 253 aaPredicted RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 CHEK2O96017 543 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 OTCP00480 354 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 ENO1P06733 434 aaKnown RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 ESRRAP11474 423 aaPredicted RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 CCR3P51677 355 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 PPP2CBP62714 309 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 PPP2CAP67775 309 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 PRKCQQ04759 706 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 FAM219BQ5XKK7 198 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 TTC23LQ6PF05 361 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 EFL1Q7Z2Z2 1120 aaKnown RBP18.54■□□□□ 0.56
SMC4-209ENST00000468653 TREML1Q86YW5 311 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 RASGRP3Q8IV61 690 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 DDIASQ8IXT1 998 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 ACTRT2Q8TDY3 377 aa18.54■□□□□ 0.56
SMC4-209ENST00000468653 FOXJ1Q92949 421 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms