RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PTGFRNQ9P2B2 879 aa9.88□□□□□ -0.83
HDAC3-203ENST00000467533 HCFC1P51610 2035 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SEC16AO15027 2179 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 FAM227AF5H4B4 570 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 H3BRJ5 948 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PES1O00541 588 aaKnown RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PRAMEF2O60811 474 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 POP7O75817 140 aaKnown RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SLCO2B1O94956 709 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 UCHL3P15374 230 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 UGT1A4P22310 534 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PSMA2P25787 234 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PRDX3P30048 256 aaKnown RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 TMEM115Q12893 351 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 MYBPHQ13203 477 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 IHHQ14623 411 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 CAMK4Q16566 473 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 MAN2A1Q16706 1144 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 CLEC16AQ2KHT3 1053 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 CES4AQ5XG92 561 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 DPY19L2P1Q6NXN4 242 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 CLEC9AQ6UXN8 241 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SHISA6Q6ZSJ9 500 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 MON1BQ7L1V2 547 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 HOOK3Q86VS8 718 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PHF13Q86YI8 300 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 TEX26Q8N6G2 289 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF655Q8N720 491 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 DNAAF3Q8N9W5 541 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 EID2BQ96D98 161 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 PITPNM3Q9BZ71 974 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SPRTNQ9H040 489 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SRMSQ9H3Y6 488 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF160Q9HCG1 818 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 NLRC4Q9NPP4 1024 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SEPT11Q9NVA2 429 aaKnown RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 ETNK2Q9NVF9 386 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 HAUS2Q9NVX0 235 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 NFKBIL1Q9UBC1 381 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-203ENST00000467533 FAM8A1Q9UBU6 413 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 ST6GALNAC2Q9UJ37 374 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 SHOC2Q9UQ13 582 aa9.87□□□□□ -0.83
HDAC3-203ENST00000467533 TCRBV5S1A1TA0A578 114 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 GOLGA6L4A6NEF3 574 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ANKRD66B4E2M5 251 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 BTN3A1O00481 513 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PRPSAP2O60256 369 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 USP1O94782 785 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 MT-CYBP00156 380 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 SLC35G4P0C7Q5 338 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PIRTP0C851 137 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 IGFBP2P18065 325 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 AMPD1P23109 780 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 CES1P23141 567 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 NDUFS1P28331 727 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 SERPINB6P35237 376 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ARL4AP40617 200 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 HCAR3P49019 387 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ADAM8P78325 824 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 GSE1Q14687 1217 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PCOLCEQ15113 449 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 VWA3BQ502W6 1294 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ALG1LQ6GMV1 187 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 Q6ZPB1 254 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 SPPL2CQ8IUH8 684 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 FAM20CQ8IXL6 584 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 SIRT6Q8N6T7 355 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 C19orf47Q8N9M1 422 aaKnown RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PHF10Q8WUB8 498 aaKnown RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 LCN9Q8WX39 176 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 FKBP10Q96AY3 582 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 VPS35Q96QK1 796 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 PCDHB18PQ96TA0 734 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 TUBGCP2Q9BSJ2 902 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ZCCHC2Q9C0B9 1178 aaKnown RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 NDST4Q9H3R1 872 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 SOX17Q9H6I2 414 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 DNAJB12Q9NXW2 375 aaKnown RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 KCNN3Q9UGI6 736 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF835Q9Y2P0 537 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 MRPS2Q9Y399 296 aaKnown RBP9.86□□□□□ -0.83
HDAC3-203ENST00000467533 COLEC10Q9Y6Z7 277 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 ABCA4P78363 2273 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 RTTNQ86VV8 2226 aa9.86□□□□□ -0.83
HDAC3-203ENST00000467533 JMJD1CQ15652 2540 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 OR2AG2A6NM03 316 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 H3BMH7 237 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 MAP2K7O14733 419 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 GADD45BO75293 160 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 RNF8O76064 485 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 MLYCDO95822 493 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 HPP00738 406 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 PYGMP11217 842 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ABOP16442 354 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ALAS2P22557 587 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms