RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 SSTR1P30872 391 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 MAGEA4P43358 317 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 GPX6P59796 221 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 TIAL1Q01085 375 aaKnown RBP eCLIP10.77□□□□□ -0.69
MSH5-212ENST00000467319 CUL1Q13616 776 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 AMZ1Q400G9 498 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 PLEKHS1Q5SXH7 462 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 NKAIN2Q5VXU1 208 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 UNC5DQ6UXZ4 953 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 ZNF574Q6ZN55 896 aaPredicted RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 CYS1Q717R9 158 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 SLC26A11Q86WA9 606 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 RASGRP3Q8IV61 690 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 ZBTB2Q8N680 514 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 OR4D9Q8NGE8 314 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 GABPB2Q8TAK5 448 aaPredicted RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 CD200R1Q8TD46 325 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 TFGQ92734 400 aaPredicted RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 SLC30A3Q99726 388 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 DPYSL5Q9BPU6 564 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 AARSD1Q9BTE6 412 aaKnown RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 MVB12BQ9H7P6 319 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 SMYD2Q9NRG4 433 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 TMEM9Q9P0T7 183 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 ZFATQ9P243 1243 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 GALPQ9UBC7 116 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 CORO1CQ9ULV4 474 aaPredicted RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 TPRP12270 2363 aaKnown RBP10.77□□□□□ -0.69
MSH5-212ENST00000467319 ZZEF1O43149 2961 aa10.77□□□□□ -0.69
MSH5-212ENST00000467319 APC2O95996 2303 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 UNC13CQ8NB66 2214 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 IGHV5-10-1A0A0J9YXX1 117 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 SPAG6O75602 509 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 UBXN7O94888 489 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 C9P02748 559 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 AHSGP02765 367 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 CAPNS1P04632 268 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 PROS1P07225 676 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 TPBGLP0DKB5 382 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
MSH5-212ENST00000467319 JUPP14923 745 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 CD9P21926 228 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 ABCG1P45844 678 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 CARSP49589 748 aaKnown RBP10.76□□□□□ -0.69
MSH5-212ENST00000467319 LIMK2P53671 638 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 INHBCP55103 352 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 HSPA14Q0VDF9 509 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 RTP5Q14D33 572 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 BRD3Q15059 726 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 RBM20Q5T481 1227 aaKnown RBP10.76□□□□□ -0.69
MSH5-212ENST00000467319 OTOAQ7RTW8 1153 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 CCDC25Q86WR0 208 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 ACVR1CQ8NER5 493 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 OR5AR1Q8NGP9 310 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 OR5K2Q8NHB8 316 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 NXPE2Q96DL1 559 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 ATXN7L3BQ96GX2 97 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 C9orf72Q96LT7 481 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 CCDC74BQ96LY2 380 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 TMEM74Q96NL1 305 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 FMO2Q99518 471 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 NDNQ99608 321 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 HGH1Q9BTY7 390 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 MENTQ9BUN1 341 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 RAB33BQ9H082 229 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 SEMA6CQ9H3T2 930 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 LRRC4CQ9HCJ2 640 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 EPHA6Q9UF33 1036 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 COLEC10Q9Y6Z7 277 aa10.76□□□□□ -0.69
MSH5-212ENST00000467319 ANKRD11Q6UB99 2663 aaPredicted RBP10.76□□□□□ -0.69
MSH5-212ENST00000467319 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 MAP1BP46821 2468 aaKnown RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 CCDC187A0A096LP49 1063 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 PMS2P1A4D2B8 440 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 OR5K3A6NET4 321 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 EIF3FO00303 357 aaPredicted RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 DXOO77932 396 aaKnown RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 MATN4O95460 622 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 ANKRD34CP0C6C1 535 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 CSE1LP55060 971 aaKnown RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 CDKN2DP55273 166 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 GFERP55789 205 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 TRA2AQ13595 282 aaKnown RBP eCLIP10.75□□□□□ -0.69
MSH5-212ENST00000467319 GRB7Q14451 532 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 C16orf72Q14CZ0 275 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 ACSBG2Q5FVE4 666 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 UBAP2Q5T6F2 1119 aaKnown RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 TMEM71Q6P5X7 295 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 IGF2-ASQ6U949 168 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 CAPN12Q6ZSI9 719 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 CEP128Q6ZU80 1094 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 NEK10Q6ZWH5 1172 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 USP53Q70EK8 1073 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 PRSS42Q7Z5A4 293 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 PIM3Q86V86 326 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 ZC3HC1Q86WB0 502 aaKnown RBP10.75□□□□□ -0.69
MSH5-212ENST00000467319 DCUN1D3Q8IWE4 304 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 TBC1D21Q8IYX1 336 aa10.75□□□□□ -0.69
MSH5-212ENST00000467319 SIDT2Q8NBJ9 832 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms