RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 FAM83DQ9H4H8 585 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 LRRC19Q9H756 370 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 KIAA1468Q9P260 1216 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 ADGRE2Q9UHX3 823 aa12.11□□□□□ -0.47
UBR4-210ENST00000466969 NXT1Q9UKK6 140 aaKnown RBP12.11□□□□□ -0.47
UBR4-210ENST00000466969 ASPDHA6ND91 283 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 SERPINA7P05543 415 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 HLA-DPA1P20036 260 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 KRT9P35527 623 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 RAB28P51157 221 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 XRCC4Q13426 336 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 HENMT1Q5T8I9 393 aaKnown RBP12.1□□□□□ -0.47
UBR4-210ENST00000466969 HEPHL1Q6MZM0 1159 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 TRNP1Q6NT89 227 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 ADGRG6Q86SQ4 1221 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
UBR4-210ENST00000466969 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 LMO3Q8TAP4 145 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 C18orf8Q96DM3 657 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 PAGE5Q96GU1 130 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 FRMD6Q96NE9 622 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
UBR4-210ENST00000466969 SLC6A16Q9GZN6 736 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 KLHL25Q9H0H3 589 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 KLHL1Q9NR64 748 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 TEKT2Q9UIF3 430 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 DNPEPQ9ULA0 475 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 PSMD13Q9UNM6 376 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
UBR4-210ENST00000466969 GOLGA8SH3BPF8 625 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 PMM2O15305 246 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 ZNF33BQ06732 778 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 DAZAP2Q15038 168 aaPredicted RBP12.09□□□□□ -0.47
UBR4-210ENST00000466969 SLC5A12Q1EHB4 618 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 ZNF569Q5MCW4 686 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 TLDC1Q6P9B6 456 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 CNSTQ6PJW8 725 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 CCDC185Q8N715 623 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 PIH1D2Q8WWB5 315 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 NUDCD1Q96RS6 583 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 WDR24Q96S15 920 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 CRB3Q9BUF7 120 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 NOD2Q9HC29 1040 aa12.09□□□□□ -0.47
UBR4-210ENST00000466969 UBE2TQ9NPD8 197 aaPredicted RBP12.09□□□□□ -0.47
UBR4-210ENST00000466969 CPAMD8Q8IZJ3 1885 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 CES2O00748 559 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 FGF10O15520 208 aaPredicted RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 CLDN7O95471 211 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 MTHFD1P11586 935 aaKnown RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 PRDX3P30048 256 aaKnown RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 CARSP49589 748 aaKnown RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 NUP107P57740 925 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 LBRQ14739 615 aaKnown RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 C15orf59Q2T9L4 293 aaPredicted RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 C10orf62Q5T681 223 aaPredicted RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 TXNRD3NBQ6F5E7 133 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 TTI2Q6NXR4 508 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 RIPOR1Q6ZS17 1223 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 NDUFAF7Q7L592 441 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 MCATQ8IVS2 390 aaKnown RBP12.08□□□□□ -0.48
UBR4-210ENST00000466969 PYROXD2Q8N2H3 581 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 EHBP1Q8NDI1 1231 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 OR4E2Q8NGC2 313 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 C8orf44Q96CB5 159 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 SMIM14Q96QK8 99 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 SLC39A8Q9C0K1 460 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 SLC26A1Q9H2B4 701 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 PKD2L2Q9NZM6 624 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 SLC24A2Q9UI40 661 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 GNPTGQ9UJJ9 305 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 TMEM59LQ9UK28 342 aa12.08□□□□□ -0.48
UBR4-210ENST00000466969 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.08□□□□□ -0.487e-8■■■□□ 17
UBR4-210ENST00000466969 A0A0J9YYE9 177 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 H3BMH7 237 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 P4HA2O15460 535 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 KCNJ13O60928 360 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 DNAJB6O75190 326 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 CDK14O94921 469 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 CNOT4O95628 575 aaKnown RBP12.07□□□□□ -0.48
UBR4-210ENST00000466969 TRBC1P01850 177 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 MYL1P05976 194 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 ZNF24P17028 368 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 SDC4P31431 198 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 UQCRC1P31930 480 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 HSPA9P38646 679 aaKnown RBP12.07□□□□□ -0.48
UBR4-210ENST00000466969 CHRNA4P43681 627 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 GABRB2P47870 512 aa12.07□□□□□ -0.48
UBR4-210ENST00000466969 ZFP36L2P47974 494 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms