RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 OR6C4Q8NGE1 309 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 BAHD1Q8TBE0 780 aaPredicted RBP14.84□□□□□ -0.03
NPHP4-205ENST00000466897 MAPK15Q8TD08 544 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 ACMSDQ8TDX5 336 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 CABS1Q96KC9 395 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 UBXN10Q96LJ8 280 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 ZIM3Q96PE6 472 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 VIPAS39Q9H9C1 493 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 CAB39LQ9H9S4 337 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 SNX15Q9NRS6 342 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 EVA1BQ9NVM1 165 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 FAM8A1Q9UBU6 413 aa14.84□□□□□ -0.03
NPHP4-205ENST00000466897 A0A087X1B8 175 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 TRIM49D1C9J1S8 452 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 GDF9O60383 454 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 RPN2P04844 631 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 MPOP05164 745 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SAT1P21673 171 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 TYK2P29597 1187 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SLCO1A2P46721 670 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 RPIAP49247 311 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SP140Q13342 867 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SEPT7Q16181 437 aaKnown RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 RPE65Q16518 533 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 PROX2Q3B8N5 592 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 TAF1BQ53T94 588 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 TMEM207Q6UWW9 146 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 CYHR1Q6ZMK1 362 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 CMC1Q7Z7K0 106 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SLC9B2Q86UD5 537 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 LCA5Q86VQ0 697 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 NAXDQ8IW45 347 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SLC35F3Q8IY50 421 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 EID2Q8N6I1 236 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 KYQ8NBH2 561 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 FBXO15Q8NCQ5 510 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 NETO1Q8TDF5 533 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SLC37A2Q8TED4 501 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 EEF1AKMT1Q8WVE0 214 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 TFGQ92734 400 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 LINGO1Q96FE5 620 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 APOLD1Q96LR9 279 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 C12orf66Q96MD2 445 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 FOPNLQ96NB1 174 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 INSM2Q96T92 566 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 DERL2Q9GZP9 239 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 STN1Q9H668 368 aaKnown RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 MVB12BQ9H7P6 319 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 UCK1Q9HA47 277 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 SCHIP1Q9P0W5 487 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 ZNF624Q9P2J8 865 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 CPNE7Q9UBL6 633 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 CTNNAL1Q9UBT7 734 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 PSMD13Q9UNM6 376 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
NPHP4-205ENST00000466897 RIF1Q5UIP0 2472 aaKnown RBP14.83□□□□□ -0.04
NPHP4-205ENST00000466897 ZFHX2Q9C0A1 2572 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 A0A096LPK6 155 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 LY6G6EA0A0G2JKS1 128 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 OR52A4PA6NMU1 304 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 GFYI3L273 518 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 SLC16A5O15375 505 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 PHGDHO43175 533 aaKnown RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 SIGLEC6O43699 453 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 NUDT21O43809 227 aaKnown RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 CBFA2T3O75081 653 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 PSIP1O75475 530 aaKnown RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 RFPL1O75677 317 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 C2P06681 752 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 C8GP07360 202 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 COL6A2P12110 1019 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 CKMT1AP12532 417 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 PNLIPP16233 465 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 GLB1P16278 677 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 CCNFP41002 786 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 SLC19A1P41440 591 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 ZNF460Q14592 562 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 NR1D2Q14995 579 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 NR0B2Q15466 257 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 RAPH1Q70E73 1250 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 HDXQ7Z353 690 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 ZNF438Q7Z4V0 828 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 PIP4P1Q86T03 277 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 TBC1D21Q8IYX1 336 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 MYO1HQ8N1T3 1032 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 ARL14Q8N4G2 192 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 OR5K2Q8NHB8 316 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 ASB11Q8WXH4 323 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 SH3KBP1Q96B97 665 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 CXorf40BQ96DE9 158 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 POLG2Q9UHN1 485 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 TLK1Q9UKI8 766 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 BTBD3Q9Y2F9 522 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 COLEC10Q9Y6Z7 277 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 U3KQA8 63 aa14.82□□□□□ -0.04
NPHP4-205ENST00000466897 GOLGA4Q13439 2230 aaKnown RBP14.82□□□□□ -0.04
NPHP4-205ENST00000466897 ANKRD12Q6UB98 2062 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 GVINP1Q7Z2Y8 2422 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms