RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HSPA4P34932 840 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 COPB2P35606 906 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 THBS3P49746 956 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 HTR6P50406 440 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZXDBP98169 803 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ACSM1Q08AH1 577 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 PNRC1Q12796 327 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZBTB17Q13105 803 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 MDH1BQ5I0G3 518 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 NDUFAF5Q5TEU4 345 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZBTB49Q6ZSB9 765 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 FAM47EQ6ZV65 393 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF611Q8N823 705 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ZNF441Q8N8Z8 693 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 GOT1L1Q8NHS2 421 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 DAZLQ92904 295 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 EXT2Q93063 718 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ERO1AQ96HE7 468 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 THOC3Q96J01 351 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 RMDN2Q96LZ7 410 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 FERMT1Q9BQL6 677 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 DDX31Q9H8H2 851 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 GRPEL1Q9HAV7 217 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 RASAL2Q9UJF2 1139 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 ABT1Q9ULW3 272 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 FLT1P17948 1338 aa4.16□□□□□ -1.74
CDC42BPA-211ENST00000466538 SAA2-SAA4A0A096LPE2 208 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 TEX13DA0A0J9YY54 714 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 FEZF1A0PJY2 475 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 C5orf60A6NFR6 353 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 NEMP2A6NFY4 417 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 MEIS2O14770 477 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PSMA7O14818 248 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 SYNGR3O43761 229 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 NTN1O95631 604 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PENKP01210 267 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 LIPFP07098 398 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 MCCP23508 829 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 KRT2P35908 639 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PSMC4P43686 418 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PDLIM4P50479 330 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 MMP15P51511 669 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 FOXG1P55316 489 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 KEAP1Q14145 624 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 NADSYN1Q6IA69 706 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 TRAT1Q6PIZ9 186 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 SUSD1Q6UWL2 747 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 C11orf57Q6ZUT1 292 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 TMPRSS11FQ6ZWK6 438 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 C16orf82Q7Z2V1 217 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 DGLUCYQ7Z3D6 616 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 COMMD2Q86X83 199 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 CCAR2Q8N163 923 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 CPSF7Q8N684 471 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 OR5M8Q8NGP6 311 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 NUDCD2Q8WVJ2 157 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 ATP6V1E2Q96A05 226 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 SPSB1Q96BD6 273 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZBTB9Q96C00 473 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 VMP1Q96GC9 406 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 OXNAD1Q96HP4 312 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZNF558Q96NG5 402 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 MGME1Q9BQP7 344 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 CSTL1Q9H114 145 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 ACKR4Q9NPB9 350 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 RALYQ9UKM9 306 aaKnown RBP4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PADI2Q9Y2J8 665 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 CACNA1IQ9P0X4 2223 aa4.15□□□□□ -1.75
CDC42BPA-211ENST00000466538 PI4K2BG5E9Z4 385 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 PSMD14O00487 310 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 PPP1R3DO95685 299 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 IGHV2-70P01814 119 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 ATP5BP06576 529 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 SAGP10523 405 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 CTNNA1P35221 906 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 HOXA1P49639 335 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 NPY4RP50391 375 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 BMXP51813 675 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 CAPZA1P52907 286 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 NAGLUP54802 743 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 HNRNPKP61978 463 aaKnown RBP eCLIP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 RPS18P62269 152 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 POLR2LP62875 67 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 PITX1P78337 314 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 RPL24P83731 157 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 TWISTNBQ3B726 338 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 MFSD12Q6NUT3 480 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 RAD9BQ6WBX8 426 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 MSANTD1Q6ZTZ1 278 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 RBM23Q86U06 439 aaKnown RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 EXOC3L1Q86VI1 746 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 LONP2Q86WA8 852 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 ZDHHC17Q8IUH5 632 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 TIGD4Q8IY51 512 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 CEP57L1Q8IYX8 460 aa4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 SAMD14Q8IZD0 417 aaPredicted RBP4.14□□□□□ -1.75
CDC42BPA-211ENST00000466538 METTL27Q8N6F8 245 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms